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The map label for this gene is yccT [C]

Identifier: 119774383

GI number: 119774383

Start: 1529335

End: 1530039

Strand: Reverse

Name: yccT [C]

Synonym: Sama_1246

Alternate gene names: 119774383

Gene position: 1530039-1529335 (Counterclockwise)

Preceding gene: 119774384

Following gene: 119774382

Centisome position: 35.53

GC content: 55.32

Gene sequence:

>705_bases
ATGAAATCAGTTTTGCCTGTCGGCGCTCTGCTTGCGCTGGCCGCTTCATCCTCGGTGTTTGCCGGCAGTCTCACCATTCC
TATGTCTTTTGAGTATCTGGCACTGGACGGCCAGGAAATTGCTACCAACAGTTTTTCCCACAAAGCCGAGCTTGACCTGT
CTCCGGGCACCCACAAGATTGCCATCCGTTACCACGACATGGTGGACGATGAGTTCAGTGACAGCCAAACCTTTGTTAAA
TCAGCCCCTTTTATTCTGACGCTCAGGGTTGATGGTGATTATGATTACTTCCTCAAACCCGCCAGTGGTGAGGTTGTCAA
ACAGCCCAAGCAGTTTGCTAAAGCGCCTCAGGTCGTGGTTAACCGTGCCGACAAGGGCGAGGTCAGCTACAAAATAGTCC
AGACAGACTACAAAGAAGACAGCTTCGTCGGTCGTCTCTTTGGTGGTTCCAAAGGCGTGGATATTGACGAAGCCGCCGCT
GCCGCCACCGCCGCCACAGTTGCTGTAGCCAGCGCAGCGCCCTCAGCACCGGCAAGTCAAGCAACTGCCCCCGTAGTCGC
TGATACTGCCGTACCGGCAGCAGCCAGCCCGGTTTCGCCCGCCGTTGGTGGCGCCCATGCGCAGCAAATGCTGCAATACT
GGTGGCTGCAAGCCGACGAGAAAACCCGCAAAGAGTTTATGAGCTGGGCAATCAAACAGCTCTGA

Upstream 100 bases:

>100_bases
CCGCAGGCTCGGAAAGTGTCGTCAGGCAATCAGTTACATTGAAGATCGTATCCAGGCATTCGAGCGGCCGTATCACAGTC
ACAATCGTTAAGGAGCAACA

Downstream 100 bases:

>100_bases
CATGATCCCTCTGGTCTATCACACCAGCTATTCCAAGCTGGTGTTGCCCCCAAAGCATCAGTTCCCCATCACCAAGTACG
CCCATCTCCGGCAGCATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MKSVLPVGALLALAASSSVFAGSLTIPMSFEYLALDGQEIATNSFSHKAELDLSPGTHKIAIRYHDMVDDEFSDSQTFVK
SAPFILTLRVDGDYDYFLKPASGEVVKQPKQFAKAPQVVVNRADKGEVSYKIVQTDYKEDSFVGRLFGGSKGVDIDEAAA
AATAATVAVASAAPSAPASQATAPVVADTAVPAAASPVSPAVGGAHAQQMLQYWWLQADEKTRKEFMSWAIKQL

Sequences:

>Translated_234_residues
MKSVLPVGALLALAASSSVFAGSLTIPMSFEYLALDGQEIATNSFSHKAELDLSPGTHKIAIRYHDMVDDEFSDSQTFVK
SAPFILTLRVDGDYDYFLKPASGEVVKQPKQFAKAPQVVVNRADKGEVSYKIVQTDYKEDSFVGRLFGGSKGVDIDEAAA
AATAATVAVASAAPSAPASQATAPVVADTAVPAAASPVSPAVGGAHAQQMLQYWWLQADEKTRKEFMSWAIKQL
>Mature_234_residues
MKSVLPVGALLALAASSSVFAGSLTIPMSFEYLALDGQEIATNSFSHKAELDLSPGTHKIAIRYHDMVDDEFSDSQTFVK
SAPFILTLRVDGDYDYFLKPASGEVVKQPKQFAKAPQVVVNRADKGEVSYKIVQTDYKEDSFVGRLFGGSKGVDIDEAAA
AATAATVAVASAAPSAPASQATAPVVADTAVPAAASPVSPAVGGAHAQQMLQYWWLQADEKTRKEFMSWAIKQL

Specific function: Unknown

COG id: COG3110

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0319 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018635 [H]

Pfam domain/function: PF09829 DUF2057 [H]

EC number: NA

Molecular weight: Translated: 24845; Mature: 24845

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSVLPVGALLALAASSSVFAGSLTIPMSFEYLALDGQEIATNSFSHKAELDLSPGTHKI
CCCCCHHHHHHHHHHCCCEEECEEEECCCEEEEEECCCHHHCCCCCCCEEEECCCCCEEE
AIRYHDMVDDEFSDSQTFVKSAPFILTLRVDGDYDYFLKPASGEVVKQPKQFAKAPQVVV
EEEEECCCCCCCCCCHHHHHCCCEEEEEEECCCCCEEEECCCCHHHHCHHHHHCCCHHHH
NRADKGEVSYKIVQTDYKEDSFVGRLFGGSKGVDIDEAAAAATAATVAVASAAPSAPASQ
CCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
ATAPVVADTAVPAAASPVSPAVGGAHAQQMLQYWWLQADEKTRKEFMSWAIKQL
CCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSVLPVGALLALAASSSVFAGSLTIPMSFEYLALDGQEIATNSFSHKAELDLSPGTHKI
CCCCCHHHHHHHHHHCCCEEECEEEECCCEEEEEECCCHHHCCCCCCCEEEECCCCCEEE
AIRYHDMVDDEFSDSQTFVKSAPFILTLRVDGDYDYFLKPASGEVVKQPKQFAKAPQVVV
EEEEECCCCCCCCCCHHHHHCCCEEEEEEECCCCCEEEECCCCHHHHCHHHHHCCCHHHH
NRADKGEVSYKIVQTDYKEDSFVGRLFGGSKGVDIDEAAAAATAATVAVASAAPSAPASQ
CCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
ATAPVVADTAVPAAASPVSPAVGGAHAQQMLQYWWLQADEKTRKEFMSWAIKQL
CCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]