| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119774381
Identifier: 119774381
GI number: 119774381
Start: 1528118
End: 1528402
Strand: Reverse
Name: 119774381
Synonym: Sama_1244
Alternate gene names: NA
Gene position: 1528402-1528118 (Counterclockwise)
Preceding gene: 119774382
Following gene: 119774373
Centisome position: 35.49
GC content: 46.67
Gene sequence:
>285_bases ATGCAACTCGAAATCCGAAACTACTATGAAGTGCTGCTCATGGAAATTTTGTCTGACGAAGGCTTGATGGATGAGCTTCC TGAAGATTATCTGGCCGACCTGTCCTGTATTACCCTCAATCAGCTTCCCGTGCGTTACATCCGCCATCTGGTAGACACGT ATTTTTTTGAGGACTATCAGGAGCTGAAGCAAATGCGCAACGAAATACAAACGGCACTGGAAAAGTCCCGCGCATTTTTG AAGAAACGAAATCTGGAGCGGCTTCGCGAACGCGAAAATGACTAG
Upstream 100 bases:
>100_bases TACTCTGCAAATCCACTACACTTGAGCGAAAGACACAGCCAATTATTTATTGCCGCCAATCAGGTATGGCAAGGGGATAA TGAATAACGCGGAGCATCTT
Downstream 100 bases:
>100_bases ATTGGTGACGTCCCCAGAGCCACACCCCGGCACACGAGTCGCCTGCTACGGTTGCTTCCTTCCGGACCTGGCCGAGTTCA CAGGTTATCATTGCGGGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MQLEIRNYYEVLLMEILSDEGLMDELPEDYLADLSCITLNQLPVRYIRHLVDTYFFEDYQELKQMRNEIQTALEKSRAFL KKRNLERLREREND
Sequences:
>Translated_94_residues MQLEIRNYYEVLLMEILSDEGLMDELPEDYLADLSCITLNQLPVRYIRHLVDTYFFEDYQELKQMRNEIQTALEKSRAFL KKRNLERLREREND >Mature_94_residues MQLEIRNYYEVLLMEILSDEGLMDELPEDYLADLSCITLNQLPVRYIRHLVDTYFFEDYQELKQMRNEIQTALEKSRAFL KKRNLERLREREND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11520; Mature: 11520
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLEIRNYYEVLLMEILSDEGLMDELPEDYLADLSCITLNQLPVRYIRHLVDTYFFEDYQ CCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELKQMRNEIQTALEKSRAFLKKRNLERLREREND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQLEIRNYYEVLLMEILSDEGLMDELPEDYLADLSCITLNQLPVRYIRHLVDTYFFEDYQ CCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELKQMRNEIQTALEKSRAFLKKRNLERLREREND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA