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The map label for this gene is yohC [H]

Identifier: 119774354

GI number: 119774354

Start: 1498901

End: 1499497

Strand: Reverse

Name: yohC [H]

Synonym: Sama_1217

Alternate gene names: 119774354

Gene position: 1499497-1498901 (Counterclockwise)

Preceding gene: 119774356

Following gene: 119774350

Centisome position: 34.82

GC content: 48.58

Gene sequence:

>597_bases
ATGGTACTGAATCACTTATTGGGGCTATACACTCATCCAAAAGAAGAGTGGCACACAATTGAAAAGAACCACGAAGCACT
GAAAAGCAGCATGAGTCATCTTTTGCTCATCGCACTCATTCCACCTATTTGCAGTTACTTTGCCATGGCCCATATCGGCT
GGAATCCGGGCGCAGGAGAGCCTTTATTCCTGACCAGTCAAAGTGCCATTTATATGTCCGTTGGTATGTATTTTGGCTTG
ATAGCCGGTGTATTTGGACTTGCCTACCTGGCACATTGGATGGCCATTACCTTCGATGCCAAACCTGACTTTACCCAAGC
TCTCGAATTGGCAACCTACACTGCCACCCCCCTCTTTATGGTGGGCCTGTCGGCGCTCTATCCTGTGCTTTGGTTTATGA
TGGTGGTTGGCCTGATTGGTCTGGCTTACTCGGTTTACCTGCTATACACCGGCGTACCCATTATCATGAACATCCCTGAA
GAAAAAGGCTTTATTTACGCGAGTTCTGTGGTGACCGCAGGTCTTGTTTTGCTGGTTGCTCTGATGGCTGGCAGCGTAAT
TTTGTGGAGCCTGGGCTTTGGCCCAATGCTGCAGTAA

Upstream 100 bases:

>100_bases
ACGGATGTCAATTTTTGTTCAATAAATAATCTCAGAGCTGTAACAGGCTCGTCTGCAGTTTGGCGAGCACGGGGATCACT
GCTGAACAAGGATAATTATA

Downstream 100 bases:

>100_bases
TTTAAAGCAACAGAGAGTTTTTCACCGAAAAAAAAGGCGCCATTGGCGCCTTTTAAGTTATCTGCTCAATAATCAGAAGG
ATTCGCGCAGAGCCACCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MVLNHLLGLYTHPKEEWHTIEKNHEALKSSMSHLLLIALIPPICSYFAMAHIGWNPGAGEPLFLTSQSAIYMSVGMYFGL
IAGVFGLAYLAHWMAITFDAKPDFTQALELATYTATPLFMVGLSALYPVLWFMMVVGLIGLAYSVYLLYTGVPIIMNIPE
EKGFIYASSVVTAGLVLLVALMAGSVILWSLGFGPMLQ

Sequences:

>Translated_198_residues
MVLNHLLGLYTHPKEEWHTIEKNHEALKSSMSHLLLIALIPPICSYFAMAHIGWNPGAGEPLFLTSQSAIYMSVGMYFGL
IAGVFGLAYLAHWMAITFDAKPDFTQALELATYTATPLFMVGLSALYPVLWFMMVVGLIGLAYSVYLLYTGVPIIMNIPE
EKGFIYASSVVTAGLVLLVALMAGSVILWSLGFGPMLQ
>Mature_198_residues
MVLNHLLGLYTHPKEEWHTIEKNHEALKSSMSHLLLIALIPPICSYFAMAHIGWNPGAGEPLFLTSQSAIYMSVGMYFGL
IAGVFGLAYLAHWMAITFDAKPDFTQALELATYTATPLFMVGLSALYPVLWFMMVVGLIGLAYSVYLLYTGVPIIMNIPE
EKGFIYASSVVTAGLVLLVALMAGSVILWSLGFGPMLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082055, Length=192, Percent_Identity=37.5, Blast_Score=130, Evalue=9e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006977 [H]

Pfam domain/function: PF04893 Yip1 [H]

EC number: NA

Molecular weight: Translated: 21681; Mature: 21681

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLNHLLGLYTHPKEEWHTIEKNHEALKSSMSHLLLIALIPPICSYFAMAHIGWNPGAGE
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PLFLTSQSAIYMSVGMYFGLIAGVFGLAYLAHWMAITFDAKPDFTQALELATYTATPLFM
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH
VGLSALYPVLWFMMVVGLIGLAYSVYLLYTGVPIIMNIPEEKGFIYASSVVTAGLVLLVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEHHHHHHHHHHHHHH
LMAGSVILWSLGFGPMLQ
HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVLNHLLGLYTHPKEEWHTIEKNHEALKSSMSHLLLIALIPPICSYFAMAHIGWNPGAGE
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PLFLTSQSAIYMSVGMYFGLIAGVFGLAYLAHWMAITFDAKPDFTQALELATYTATPLFM
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH
VGLSALYPVLWFMMVVGLIGLAYSVYLLYTGVPIIMNIPEEKGFIYASSVVTAGLVLLVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEHHHHHHHHHHHHHH
LMAGSVILWSLGFGPMLQ
HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]