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The map label for this gene is nrfB [C]

Identifier: 119774350

GI number: 119774350

Start: 1493107

End: 1494063

Strand: Reverse

Name: nrfB [C]

Synonym: Sama_1213

Alternate gene names: 119774350

Gene position: 1494063-1493107 (Counterclockwise)

Preceding gene: 119774354

Following gene: 119774349

Centisome position: 34.7

GC content: 57.37

Gene sequence:

>957_bases
ATGAAGATGGAAATCCCCTTGCAATGCAGGATGCTGACCCTGTGTCTGCTGAGCCTGCTGTTTTCGTTTCAGGCAGCAGC
AACGCCCTGGAAAGACATGCCGCCGTCAGAGGTTGAGGCGACGCTCGACAAAAAGTTCGCCGAAGGCAAGTACTCCCCAA
AGGGTGCTGACAGCTGTTTGATGTGCCACAAGAAGAGCGCAACCGTCATGGCGCTGTTCGACAACGTCCACGGCAGTACC
CACTCCAGCGCGTCCCCCATGGCCGATCTCCAATGCGAAGCCTGCCACGGCCCTATGGGCAACCACAACAAGGGCGGTAA
GGAACCGATGATCACCTTCGGTAAAGACGCCCCGGTCGCCGCCGACAAACAAAACAGCGTGTGCCTTTCCTGCCATCAGG
ACGACAAGCGTATGGCCTGGGAAGGCAGCCATCACAACAGCGCTGACATTCCCTGCGCAAGCTGCCACCTGATCCATACT
GCCAAGGATCCGGTTCAGCAAAGAGCCACCGAAGTCGAGGTGTGTACTGCGTGTCATCTCGAACAAAAGGCCGATATCCA
CAAGCGCTCCAGTCATCCAGTCGAAAACGGCCAGATGGTGTGCAGTGACTGCCACAATCCCCACGGAAGCCTGGGTGAGT
CCAGCCTTAAGCAGATGAGCATCAATGAGAATTGCTATGCCTGCCACGCCGAAAAACGCGGTCCCAAACTCTGGGAACAC
GCCCCGGTAACAGATAACTGCGCCAGTTGCCATCAGGTGCATGGCAGCGTCAACGAAGCCATGCTGACGATTAAGGCACC
TCAGCTGTGTCAGCAATGCCATGCCAGTGTTGGCCACACCGCCAATGCCCAGTTCGGCACGGCACCCAGTGCCTTTACCG
CCGGACAGAGCTGTATGAACTGCCACAGTCAGGTCCACGGCTCAAATCATCCATCCGGCAAGCTGCTGCAGCGCTAA

Upstream 100 bases:

>100_bases
GCAAATTTAAACTACACTTTTGCATTAGTGCTTCGCTCAATTACTCAATTAGCGAACCATAAATAACTATAAACCCGAAC
GCGCCTCAGGAAGTATGAGA

Downstream 100 bases:

>100_bases
GGAGACTCAAATGAAACCCCATTTCTCCCCCACGCTGAGCCTGATAGCTTCCGCCATACTCCTGGGGATGTCCGGACAGG
TCTTGGCGGGTTACGGCTTG

Product: decaheme cytochrome c MtrD

Products: oxidized cytochrome C552; NH3 [C]

Alternate protein names: Decaheme C-Type Cytochrome DmsE Family; Decaheme Cytochrome C MtrA; Decaheme Cytochrome C; Nitrate/TMAO Reductase; Doubled CXXCH Domain-Containing Protein; Cytochrome; Lipoprotein Cytochrome C; Multiheme Cytochrome; Decaheme Cytochrome C MtrD; Multiheme Cytochrome Family Protein; Double CXXCH Motif-Containing Protein; Cytochrome C; Cytochrome C-Type Protein NrfB; Multiheme C-Type Cytochrome

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MKMEIPLQCRMLTLCLLSLLFSFQAAATPWKDMPPSEVEATLDKKFAEGKYSPKGADSCLMCHKKSATVMALFDNVHGST
HSSASPMADLQCEACHGPMGNHNKGGKEPMITFGKDAPVAADKQNSVCLSCHQDDKRMAWEGSHHNSADIPCASCHLIHT
AKDPVQQRATEVEVCTACHLEQKADIHKRSSHPVENGQMVCSDCHNPHGSLGESSLKQMSINENCYACHAEKRGPKLWEH
APVTDNCASCHQVHGSVNEAMLTIKAPQLCQQCHASVGHTANAQFGTAPSAFTAGQSCMNCHSQVHGSNHPSGKLLQR

Sequences:

>Translated_318_residues
MKMEIPLQCRMLTLCLLSLLFSFQAAATPWKDMPPSEVEATLDKKFAEGKYSPKGADSCLMCHKKSATVMALFDNVHGST
HSSASPMADLQCEACHGPMGNHNKGGKEPMITFGKDAPVAADKQNSVCLSCHQDDKRMAWEGSHHNSADIPCASCHLIHT
AKDPVQQRATEVEVCTACHLEQKADIHKRSSHPVENGQMVCSDCHNPHGSLGESSLKQMSINENCYACHAEKRGPKLWEH
APVTDNCASCHQVHGSVNEAMLTIKAPQLCQQCHASVGHTANAQFGTAPSAFTAGQSCMNCHSQVHGSNHPSGKLLQR
>Mature_318_residues
MKMEIPLQCRMLTLCLLSLLFSFQAAATPWKDMPPSEVEATLDKKFAEGKYSPKGADSCLMCHKKSATVMALFDNVHGST
HSSASPMADLQCEACHGPMGNHNKGGKEPMITFGKDAPVAADKQNSVCLSCHQDDKRMAWEGSHHNSADIPCASCHLIHT
AKDPVQQRATEVEVCTACHLEQKADIHKRSSHPVENGQMVCSDCHNPHGSLGESSLKQMSINENCYACHAEKRGPKLWEH
APVTDNCASCHQVHGSVNEAMLTIKAPQLCQQCHASVGHTANAQFGTAPSAFTAGQSCMNCHSQVHGSNHPSGKLLQR

Specific function: Plays A Role In Nitrite Reduction. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34401; Mature: 34401

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
11.3 %Cys+Met (Translated Protein)
6.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
11.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMEIPLQCRMLTLCLLSLLFSFQAAATPWKDMPPSEVEATLDKKFAEGKYSPKGADSCL
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEE
MCHKKSATVMALFDNVHGSTHSSASPMADLQCEACHGPMGNHNKGGKEPMITFGKDAPVA
EEECCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCC
ADKQNSVCLSCHQDDKRMAWEGSHHNSADIPCASCHLIHTAKDPVQQRATEVEVCTACHL
CCCCCCEEEEECCCCCCCEECCCCCCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHH
EQKADIHKRSSHPVENGQMVCSDCHNPHGSLGESSLKQMSINENCYACHAEKRGPKLWEH
HHHHHHHHHCCCCCCCCCEEEHHCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCC
APVTDNCASCHQVHGSVNEAMLTIKAPQLCQQCHASVGHTANAQFGTAPSAFTAGQSCMN
CCCCCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
CHSQVHGSNHPSGKLLQR
HHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKMEIPLQCRMLTLCLLSLLFSFQAAATPWKDMPPSEVEATLDKKFAEGKYSPKGADSCL
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEE
MCHKKSATVMALFDNVHGSTHSSASPMADLQCEACHGPMGNHNKGGKEPMITFGKDAPVA
EEECCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCC
ADKQNSVCLSCHQDDKRMAWEGSHHNSADIPCASCHLIHTAKDPVQQRATEVEVCTACHL
CCCCCCEEEEECCCCCCCEECCCCCCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHH
EQKADIHKRSSHPVENGQMVCSDCHNPHGSLGESSLKQMSINENCYACHAEKRGPKLWEH
HHHHHHHHHCCCCCCCCCEEEHHCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCC
APVTDNCASCHQVHGSVNEAMLTIKAPQLCQQCHASVGHTANAQFGTAPSAFTAGQSCMN
CCCCCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
CHSQVHGSNHPSGKLLQR
HHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced cytochrome C552; nitrite [C]

Specific reaction: reduced cytochrome C552 + nitrite = oxidized cytochrome C552 + NH3 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA