The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774272

Identifier: 119774272

GI number: 119774272

Start: 1384145

End: 1384492

Strand: Reverse

Name: 119774272

Synonym: Sama_1135

Alternate gene names: NA

Gene position: 1384492-1384145 (Counterclockwise)

Preceding gene: 119774273

Following gene: 119774266

Centisome position: 32.15

GC content: 50.0

Gene sequence:

>348_bases
ATGAAGATACAACACGCTTTTGCCGCACTGACTTTAGGATGCCTGAGTTTGGGTGCAACCGCCGCCATGAGCCCCGATGT
GGAAAACAAACTGATTGCAGTATGTAAAACCGGATTGAGTGACAGCCAGGTGCAATTCCTTTCGACCATGAAAGAACACC
GCATTAACGAAACCCGGGTGTTCCCTCGCTTGGTTTGCAACGGTGAAACCTTCTATGACTTCGCCGTATCCAACGGGTCA
AACCGCACGGCCGAGCGCATTGCCCGCTACCTGCCAGGTAAAGTAACCATCAAAGATTTGGCCATGAATCACGCCGATGA
AATGCTTTATGTAGAGTTCGACAAGTAG

Upstream 100 bases:

>100_bases
GATAGTCACAAATTCATACAGAATGACATACTTTATGTGTCGATTTTGTGTAAGGAGAGAGCTGTAATCTAGGGGTGTCT
GTACAACGAGGAGAGTACAA

Downstream 100 bases:

>100_bases
CACAAAAAGGCGCCGAGGCGCCTTTTTGGTGGGTGCTGTGTTAAAACACCACGGTCTTGTTACCGTAAACCACGACCTTA
TCGGCCAGTACCAAACCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MKIQHAFAALTLGCLSLGATAAMSPDVENKLIAVCKTGLSDSQVQFLSTMKEHRINETRVFPRLVCNGETFYDFAVSNGS
NRTAERIARYLPGKVTIKDLAMNHADEMLYVEFDK

Sequences:

>Translated_115_residues
MKIQHAFAALTLGCLSLGATAAMSPDVENKLIAVCKTGLSDSQVQFLSTMKEHRINETRVFPRLVCNGETFYDFAVSNGS
NRTAERIARYLPGKVTIKDLAMNHADEMLYVEFDK
>Mature_115_residues
MKIQHAFAALTLGCLSLGATAAMSPDVENKLIAVCKTGLSDSQVQFLSTMKEHRINETRVFPRLVCNGETFYDFAVSNGS
NRTAERIARYLPGKVTIKDLAMNHADEMLYVEFDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12774; Mature: 12774

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIQHAFAALTLGCLSLGATAAMSPDVENKLIAVCKTGLSDSQVQFLSTMKEHRINETRV
CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHH
FPRLVCNGETFYDFAVSNGSNRTAERIARYLPGKVTIKDLAMNHADEMLYVEFDK
HHHEEECCCEEEEEEECCCCCHHHHHHHHHCCCCEEHHHHHHCCCCCEEEEEECC
>Mature Secondary Structure
MKIQHAFAALTLGCLSLGATAAMSPDVENKLIAVCKTGLSDSQVQFLSTMKEHRINETRV
CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHH
FPRLVCNGETFYDFAVSNGSNRTAERIARYLPGKVTIKDLAMNHADEMLYVEFDK
HHHEEECCCEEEEEEECCCCCHHHHHHHHHCCCCEEHHHHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA