The gene/protein map for NC_007969 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774261

Identifier: 119774261

GI number: 119774261

Start: 1374588

End: 1374944

Strand: Direct

Name: 119774261

Synonym: Sama_1124

Alternate gene names: NA

Gene position: 1374588-1374944 (Clockwise)

Preceding gene: 119774258

Following gene: 119774263

Centisome position: 31.92

GC content: 51.54

Gene sequence:

>357_bases
ATGAAAGCAGTTTATTTGGGGCTGACGTTGGTTGGGAGTCTGGTACTCGGTGGTTGTGTGGTTAACGTGGGTGACGGTGT
CAGTGGTTATCAGGATTGGGAAAAAACACAGCTGGATAACAGAGAGCATCTAACGCAGCTCAGCTTGGGAATGGATAAAT
CCCAGGTTCTGGCATTGATGGGCAAAGCGGACTTCCATGAAGCCTGGCAGGCCGACGGTAAAGAAGTGCAGGTGTTTTTT
TACCGCACCCACAGATTACACGGTGATGGCAGCACCACCAAAGAAGAATGCACTCCTGTAGTACTGCACGATAACCGTTT
GGTTGGCTGGGGTGAAACCGCCTATCGCCGGGGCTGA

Upstream 100 bases:

>100_bases
TCAATTTAAAACAATGCATTACGTTTTGGCGTATTTCTTGCTGACCCTTGGCCGCTATGACTGTGAGTTTATCACAGCGG
TCATCATAAGGAGAAAAGGA

Downstream 100 bases:

>100_bases
GCTATTTACGTAGCCGGGTGTCCAACAGGTCAATGAGTTCTGACCAGTTGGCATCCATTTCCAGCGATTCTCTTAAAAAC
CCGGCTTGTGCCGGCGTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MKAVYLGLTLVGSLVLGGCVVNVGDGVSGYQDWEKTQLDNREHLTQLSLGMDKSQVLALMGKADFHEAWQADGKEVQVFF
YRTHRLHGDGSTTKEECTPVVLHDNRLVGWGETAYRRG

Sequences:

>Translated_118_residues
MKAVYLGLTLVGSLVLGGCVVNVGDGVSGYQDWEKTQLDNREHLTQLSLGMDKSQVLALMGKADFHEAWQADGKEVQVFF
YRTHRLHGDGSTTKEECTPVVLHDNRLVGWGETAYRRG
>Mature_118_residues
MKAVYLGLTLVGSLVLGGCVVNVGDGVSGYQDWEKTQLDNREHLTQLSLGMDKSQVLALMGKADFHEAWQADGKEVQVFF
YRTHRLHGDGSTTKEECTPVVLHDNRLVGWGETAYRRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13095; Mature: 13095

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAVYLGLTLVGSLVLGGCVVNVGDGVSGYQDWEKTQLDNREHLTQLSLGMDKSQVLALM
CCEEEHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHCCCCHHHHHHHHCCCCHHHHHHHH
GKADFHEAWQADGKEVQVFFYRTHRLHGDGSTTKEECTPVVLHDNRLVGWGETAYRRG
CCCCHHHHHCCCCCEEEEEEEEEEEEECCCCCCHHHCCEEEEECCEEEECCCHHCCCC
>Mature Secondary Structure
MKAVYLGLTLVGSLVLGGCVVNVGDGVSGYQDWEKTQLDNREHLTQLSLGMDKSQVLALM
CCEEEHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHCCCCHHHHHHHHCCCCHHHHHHHH
GKADFHEAWQADGKEVQVFFYRTHRLHGDGSTTKEECTPVVLHDNRLVGWGETAYRRG
CCCCHHHHHCCCCCEEEEEEEEEEEEECCCCCCHHHCCEEEEECCEEEECCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA