| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119774263
Identifier: 119774263
GI number: 119774263
Start: 1375311
End: 1375952
Strand: Direct
Name: 119774263
Synonym: Sama_1126
Alternate gene names: NA
Gene position: 1375311-1375952 (Clockwise)
Preceding gene: 119774261
Following gene: 119774264
Centisome position: 31.94
GC content: 50.31
Gene sequence:
>642_bases GTGGAACACCAAACTAAGGAAAGGTTTCGCGCTGTTTATCTCACCGCTGAAGATTTGAGGGTTGCCGCTTCAATTCTGTA TAACGCGTACCATGATGACCCGTTTTTCATGCAAACCCTTGGGTACGAAGACAAGGTCTCTTACGAGCAAAAACTCCGGG CCGCCATTCGCGAAGAGCTCAACGAATTGTGGCAACAGGAGCAAACCCTGGTGGGTTGGTTCGATGAAGAACGCCTGATA GGCATTGCCTGCGTGGTCAGCCAACATGCGCCCTTGGGGGAAGCTAAAAATTGGCATTGGCGCCTGAAAATGTTGCTGGG TACAGGGTGGCAGTCTACCCAGATGATGTTGAAGAAAGAGGCCCAAATTTTGGAACACCTGCCCGGTAAGGCCTGTGGCA TTTTGCAATTTATTGCGCTGGCGCCAACTGAGCAGGGTAAGGGGCATGGTCAACAACTGCTTAAAGCGGTGCAGTCATGG TGTGACGATCAGCCTGAGTTGGATGGCATAGGGGTATTTGTCAGCCATCCGTTGCATAAGCACCTTTTCCAATCCAATGG TTTTGAAAGCCTAGGCCCCATCCACTTTGATAAAGTTGAAGGTGAGCTGATGTTTTATCGCAGGCCATCCAATGAAGCCT GA
Upstream 100 bases:
>100_bases TGATTGCTCGCGTTAAAAAGGCAAACTCGATTAATAATTGCACTTTTTTCAAGGCTTGTTACATTGGTTTATGTGTGATC TGGATCAAGGAATAACAAGA
Downstream 100 bases:
>100_bases GTTTCACAGTTTCAGCGAGTTTTACCCCTATTATCTCAGTGAGCACACCCATCCGCTTTGCCGCGCATTACACTACCTGG GATCATCCTTGGTGCTGTTA
Product: acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; GNAT Family Acetyltransferase; Acetyltransferase GNAT Family; GCN5-Like N-Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MEHQTKERFRAVYLTAEDLRVAASILYNAYHDDPFFMQTLGYEDKVSYEQKLRAAIREELNELWQQEQTLVGWFDEERLI GIACVVSQHAPLGEAKNWHWRLKMLLGTGWQSTQMMLKKEAQILEHLPGKACGILQFIALAPTEQGKGHGQQLLKAVQSW CDDQPELDGIGVFVSHPLHKHLFQSNGFESLGPIHFDKVEGELMFYRRPSNEA
Sequences:
>Translated_213_residues MEHQTKERFRAVYLTAEDLRVAASILYNAYHDDPFFMQTLGYEDKVSYEQKLRAAIREELNELWQQEQTLVGWFDEERLI GIACVVSQHAPLGEAKNWHWRLKMLLGTGWQSTQMMLKKEAQILEHLPGKACGILQFIALAPTEQGKGHGQQLLKAVQSW CDDQPELDGIGVFVSHPLHKHLFQSNGFESLGPIHFDKVEGELMFYRRPSNEA >Mature_213_residues MEHQTKERFRAVYLTAEDLRVAASILYNAYHDDPFFMQTLGYEDKVSYEQKLRAAIREELNELWQQEQTLVGWFDEERLI GIACVVSQHAPLGEAKNWHWRLKMLLGTGWQSTQMMLKKEAQILEHLPGKACGILQFIALAPTEQGKGHGQQLLKAVQSW CDDQPELDGIGVFVSHPLHKHLFQSNGFESLGPIHFDKVEGELMFYRRPSNEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24522; Mature: 24522
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHQTKERFRAVYLTAEDLRVAASILYNAYHDDPFFMQTLGYEDKVSYEQKLRAAIREEL CCCCHHHHHHHHEECHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHH NELWQQEQTLVGWFDEERLIGIACVVSQHAPLGEAKNWHWRLKMLLGTGWQSTQMMLKKE HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHEEEEEECCCCCHHHHHHHHHH AQILEHLPGKACGILQFIALAPTEQGKGHGQQLLKAVQSWCDDQPELDGIGVFVSHPLHK HHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEHEECCHHHH HLFQSNGFESLGPIHFDKVEGELMFYRRPSNEA HHHHCCCCCCCCCEEEEECCCEEEEEECCCCCC >Mature Secondary Structure MEHQTKERFRAVYLTAEDLRVAASILYNAYHDDPFFMQTLGYEDKVSYEQKLRAAIREEL CCCCHHHHHHHHEECHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHH NELWQQEQTLVGWFDEERLIGIACVVSQHAPLGEAKNWHWRLKMLLGTGWQSTQMMLKKE HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHEEEEEECCCCCHHHHHHHHHH AQILEHLPGKACGILQFIALAPTEQGKGHGQQLLKAVQSWCDDQPELDGIGVFVSHPLHK HHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEHEECCHHHH HLFQSNGFESLGPIHFDKVEGELMFYRRPSNEA HHHHCCCCCCCCCEEEEECCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA