The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774245

Identifier: 119774245

GI number: 119774245

Start: 1342969

End: 1344999

Strand: Reverse

Name: 119774245

Synonym: Sama_1108

Alternate gene names: NA

Gene position: 1344999-1342969 (Counterclockwise)

Preceding gene: 119774247

Following gene: 119774243

Centisome position: 31.23

GC content: 57.61

Gene sequence:

>2031_bases
ATGCGCTATTCACTGCTGCTGTTGGCCATGGCCGCCAGCCTGCCATTGCAGGCCAAAACCTTAAGCCTCAAGTCCCCCAA
TGGCGAGATTGAACTTAGGGTAAGCGATGATGACGCCCCCCACTACGCCGTGCTGTTTCATGGTAAGCCTGTGATTGGCG
CCTCCAAACTGGGGTTTGATTTCACCAATGCCGCCAACTTTCGCGGCGGTTTTGATATCACAGACAGCCAAAGGGCCACG
GTGGACAGCAGCTGGGAGCAGCCCTGGGGCGAGGCGCGCATCATTGAAGATAAGCACAACGAGCTTGTGGTGAGCTTTAC
TCACCCAGACAGCAAACAAGCCTACAAGGTGCGCTTTCGCGCCTTTGACGATGGCGTGGGCTTTCGCTACGAGGTCAATG
CCAATACGCCCCTGAACATAGGCCGCGAGCTCACCGAGTTTGCCATTGAGGATGCCGACAAGGCCGAGGCCTGGTGGATC
CCGGGCCGTGGCTGGAACCGCTACGAGTATCTCTATCAGCACAGCAAGCTTGCCGATGCCGCCCTGGTGCAAACGCCTTT
TACCTTAAAAAACAAGGATGGGGTGCATATTGCCATCCACGAGGCGGCCCTGGTGGACTACGCCGCCATGACCCTGAATC
AGCGCCGACCCGGCACCTTTGTTGCCGAGCTCACCCCCTGGTCAGATGGGGTGGCGGTTAAAACCAATGGCACCTTCAAC
ACCCCCTGGCGCACGCTGCACATTGCGCCCAATGCCACCGGACTGATTAACTCGCACCTTATACTTAATCTTAACGAGCC
CAATCAGCTTGGGGATGTGTCCTGGGTCGAGCCCGGCAAGTACGTGGGTATTTGGTGGGGCATGCACATCAATAAAAACA
CCTGGGGCAGCGGCAGCCAGCATGGCGCCACCACAGCTGAGACCAAAAAGTACCTGCGCTTTGCCGCCGACAATGGCTTT
GATGGGGTGCTGGTGGAAGGCTGGAATATCGGCTGGGACGGCGACTGGTTCCACAATGGCGATTTGTTCAGCTTTACCAA
GCCCTTTGCCGATTTTGATATCAAGGCCATTGCCGATTATGGCCGCGAAGTGGGCGCCAGGCTGATTGGCCACCACGAAA
CCTCCGGCAGCGTCAGCAACTACCGCAAACAGTGGGACGGCGCCTTCAGTCTGTACCAAAAGATGGGCGTTGCCCAAGTA
AAAACCGGCTATGTGGCCGATGGCGGCAACATCAAACGCATCGATGAAAACGGCCTTGAGCGCTTTGAGTGGCACGATGG
CCAGTTTATGGTGGGCGAGTATCTGGATAACGTGAAAACCGCCGCCAAATACCAGATAAGCATCAACACCCACGAGCCCA
TCAAGGACACAGGACTGCGCCGCACCTACCCCAACTGGCTGGCCCGCGAGGGTGCCCGTGGGCAGGAATACAATGCCTGG
GGCAATCCGCCCAACCCGCCGGAGCACATCGCCATGCTGTCGTTCACCCGCATGCTGGCAGGCCCCATGGACTTTACTCC
GGGTATCTTCGACATGAGCTTTAATGGCCTTGGCGACAACACAAACCGCCCCCAAAGCACCCTCGCCAAGCAGCTGGCCC
TGTATGTGGTGCTCTACAGCCCCATCCAGATGGCGGCCGATTTGCCCGAGAACTACTTAAAACGCCCGGACGCCTTTCAA
TTTATCAAAGACGTACCCACAGACTGGGAGCAGAGTATTGCCCTCGATGGCGCGGTGGGCGACTTTGTGGTGATGGCCCG
TAAAGAGCGCAAAGCCCGCCAATACAGCGGCAACGACTGGTATCTGGGCGCCGTGACCGACGAAAATGCCCGGGATGTGA
CGGTGAAGCTGGATTTCCTCGAGCCCGGCAAAACCTTTGAGGCGCAGATTTATCAGGACGGCAAAGACGCCGAGTGGAAA
TGGCGCCCCTATGAGATGGATATCAAAAAGCAAACCGTACGCAAGGGCGATACCCTCAGCCTGCATCTGGCCGAAGGTGG
CGGCGCCGCTGTACGCCTGAAAGCACTCTAA

Upstream 100 bases:

>100_bases
ACGTCTGCCGGGCTGAATACGTATGCAGCTTATGTCCCCCGGCGCACACCTTCGCTAAGGTGGTCACAAATAAAAAATGA
CACCTTACAAGGAATGATAA

Downstream 100 bases:

>100_bases
GGCCAAAGGCAGCCGCCCAGATCAGTCATCCGGGCATAACCCTTTCACTACCTCACCTTTGACTAACTGGCTTTTGACTA
ACCGGCTTTTGCCAACAAAA

Product: alpha-glucosidase

Products: NA

Alternate protein names: Glycoside Hydrolase; Glycoside Hydrolase Family; Alpha-Glucosidase Family Protein; Alpha-Glucosidase Protein; Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Esterase; Alpha-Glucosidase SusB; Alpha-Glucosidase-Like Protein; Secreted Protein

Number of amino acids: Translated: 676; Mature: 676

Protein sequence:

>676_residues
MRYSLLLLAMAASLPLQAKTLSLKSPNGEIELRVSDDDAPHYAVLFHGKPVIGASKLGFDFTNAANFRGGFDITDSQRAT
VDSSWEQPWGEARIIEDKHNELVVSFTHPDSKQAYKVRFRAFDDGVGFRYEVNANTPLNIGRELTEFAIEDADKAEAWWI
PGRGWNRYEYLYQHSKLADAALVQTPFTLKNKDGVHIAIHEAALVDYAAMTLNQRRPGTFVAELTPWSDGVAVKTNGTFN
TPWRTLHIAPNATGLINSHLILNLNEPNQLGDVSWVEPGKYVGIWWGMHINKNTWGSGSQHGATTAETKKYLRFAADNGF
DGVLVEGWNIGWDGDWFHNGDLFSFTKPFADFDIKAIADYGREVGARLIGHHETSGSVSNYRKQWDGAFSLYQKMGVAQV
KTGYVADGGNIKRIDENGLERFEWHDGQFMVGEYLDNVKTAAKYQISINTHEPIKDTGLRRTYPNWLAREGARGQEYNAW
GNPPNPPEHIAMLSFTRMLAGPMDFTPGIFDMSFNGLGDNTNRPQSTLAKQLALYVVLYSPIQMAADLPENYLKRPDAFQ
FIKDVPTDWEQSIALDGAVGDFVVMARKERKARQYSGNDWYLGAVTDENARDVTVKLDFLEPGKTFEAQIYQDGKDAEWK
WRPYEMDIKKQTVRKGDTLSLHLAEGGGAAVRLKAL

Sequences:

>Translated_676_residues
MRYSLLLLAMAASLPLQAKTLSLKSPNGEIELRVSDDDAPHYAVLFHGKPVIGASKLGFDFTNAANFRGGFDITDSQRAT
VDSSWEQPWGEARIIEDKHNELVVSFTHPDSKQAYKVRFRAFDDGVGFRYEVNANTPLNIGRELTEFAIEDADKAEAWWI
PGRGWNRYEYLYQHSKLADAALVQTPFTLKNKDGVHIAIHEAALVDYAAMTLNQRRPGTFVAELTPWSDGVAVKTNGTFN
TPWRTLHIAPNATGLINSHLILNLNEPNQLGDVSWVEPGKYVGIWWGMHINKNTWGSGSQHGATTAETKKYLRFAADNGF
DGVLVEGWNIGWDGDWFHNGDLFSFTKPFADFDIKAIADYGREVGARLIGHHETSGSVSNYRKQWDGAFSLYQKMGVAQV
KTGYVADGGNIKRIDENGLERFEWHDGQFMVGEYLDNVKTAAKYQISINTHEPIKDTGLRRTYPNWLAREGARGQEYNAW
GNPPNPPEHIAMLSFTRMLAGPMDFTPGIFDMSFNGLGDNTNRPQSTLAKQLALYVVLYSPIQMAADLPENYLKRPDAFQ
FIKDVPTDWEQSIALDGAVGDFVVMARKERKARQYSGNDWYLGAVTDENARDVTVKLDFLEPGKTFEAQIYQDGKDAEWK
WRPYEMDIKKQTVRKGDTLSLHLAEGGGAAVRLKAL
>Mature_676_residues
MRYSLLLLAMAASLPLQAKTLSLKSPNGEIELRVSDDDAPHYAVLFHGKPVIGASKLGFDFTNAANFRGGFDITDSQRAT
VDSSWEQPWGEARIIEDKHNELVVSFTHPDSKQAYKVRFRAFDDGVGFRYEVNANTPLNIGRELTEFAIEDADKAEAWWI
PGRGWNRYEYLYQHSKLADAALVQTPFTLKNKDGVHIAIHEAALVDYAAMTLNQRRPGTFVAELTPWSDGVAVKTNGTFN
TPWRTLHIAPNATGLINSHLILNLNEPNQLGDVSWVEPGKYVGIWWGMHINKNTWGSGSQHGATTAETKKYLRFAADNGF
DGVLVEGWNIGWDGDWFHNGDLFSFTKPFADFDIKAIADYGREVGARLIGHHETSGSVSNYRKQWDGAFSLYQKMGVAQV
KTGYVADGGNIKRIDENGLERFEWHDGQFMVGEYLDNVKTAAKYQISINTHEPIKDTGLRRTYPNWLAREGARGQEYNAW
GNPPNPPEHIAMLSFTRMLAGPMDFTPGIFDMSFNGLGDNTNRPQSTLAKQLALYVVLYSPIQMAADLPENYLKRPDAFQ
FIKDVPTDWEQSIALDGAVGDFVVMARKERKARQYSGNDWYLGAVTDENARDVTVKLDFLEPGKTFEAQIYQDGKDAEWK
WRPYEMDIKKQTVRKGDTLSLHLAEGGGAAVRLKAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75867; Mature: 75867

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYSLLLLAMAASLPLQAKTLSLKSPNGEIELRVSDDDAPHYAVLFHGKPVIGASKLGFD
CCHHHEEHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCEEEEEEECCCEECCHHCCCC
FTNAANFRGGFDITDSQRATVDSSWEQPWGEARIIEDKHNELVVSFTHPDSKQAYKVRFR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEEEEE
AFDDGVGFRYEVNANTPLNIGRELTEFAIEDADKAEAWWIPGRGWNRYEYLYQHSKLADA
EEECCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHH
ALVQTPFTLKNKDGVHIAIHEAALVDYAAMTLNQRRPGTFVAELTPWSDGVAVKTNGTFN
HHHCCCCEECCCCCEEEEEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCC
TPWRTLHIAPNATGLINSHLILNLNEPNQLGDVSWVEPGKYVGIWWGMHINKNTWGSGSQ
CCEEEEEECCCCCCEECCEEEEEECCCCCCCCCCEECCCCEEEEEEEEEECCCCCCCCCC
HGATTAETKKYLRFAADNGFDGVLVEGWNIGWDGDWFHNGDLFSFTKPFADFDIKAIADY
CCCCHHHHHHHHEEECCCCCCEEEEECEECCCCCCEEECCCCCEECCCCCCCCHHHHHHH
GREVGARLIGHHETSGSVSNYRKQWDGAFSLYQKMGVAQVKTGYVADGGNIKRIDENGLE
HHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHCCCEEEECCEEECCCCEEEECCCCCC
RFEWHDGQFMVGEYLDNVKTAAKYQISINTHEPIKDTGLRRTYPNWLAREGARGQEYNAW
EEEECCCCEEHHHHHCCHHCEEEEEEEECCCCCHHHCCCCCCCCHHHHHCCCCCCCCCCC
GNPPNPPEHIAMLSFTRMLAGPMDFTPGIFDMSFNGLGDNTNRPQSTLAKQLALYVVLYS
CCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHEECC
PIQMAADLPENYLKRPDAFQFIKDVPTDWEQSIALDGAVGDFVVMARKERKARQYSGNDW
HHHHHHCCCHHHHCCCCHHHHHHHCCCCHHHHEEECCCCCCEEEEEHHHHHHHHCCCCCE
YLGAVTDENARDVTVKLDFLEPGKTFEAQIYQDGKDAEWKWRPYEMDIKKQTVRKGDTLS
EEEEEECCCCCEEEEEEEEECCCCCEEEEEEECCCCCCEEECCEECCHHHHHHCCCCEEE
LHLAEGGGAAVRLKAL
EEEECCCCEEEEEEEC
>Mature Secondary Structure
MRYSLLLLAMAASLPLQAKTLSLKSPNGEIELRVSDDDAPHYAVLFHGKPVIGASKLGFD
CCHHHEEHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCEEEEEEECCCEECCHHCCCC
FTNAANFRGGFDITDSQRATVDSSWEQPWGEARIIEDKHNELVVSFTHPDSKQAYKVRFR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEEEEE
AFDDGVGFRYEVNANTPLNIGRELTEFAIEDADKAEAWWIPGRGWNRYEYLYQHSKLADA
EEECCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHH
ALVQTPFTLKNKDGVHIAIHEAALVDYAAMTLNQRRPGTFVAELTPWSDGVAVKTNGTFN
HHHCCCCEECCCCCEEEEEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCC
TPWRTLHIAPNATGLINSHLILNLNEPNQLGDVSWVEPGKYVGIWWGMHINKNTWGSGSQ
CCEEEEEECCCCCCEECCEEEEEECCCCCCCCCCEECCCCEEEEEEEEEECCCCCCCCCC
HGATTAETKKYLRFAADNGFDGVLVEGWNIGWDGDWFHNGDLFSFTKPFADFDIKAIADY
CCCCHHHHHHHHEEECCCCCCEEEEECEECCCCCCEEECCCCCEECCCCCCCCHHHHHHH
GREVGARLIGHHETSGSVSNYRKQWDGAFSLYQKMGVAQVKTGYVADGGNIKRIDENGLE
HHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHCCCEEEECCEEECCCCEEEECCCCCC
RFEWHDGQFMVGEYLDNVKTAAKYQISINTHEPIKDTGLRRTYPNWLAREGARGQEYNAW
EEEECCCCEEHHHHHCCHHCEEEEEEEECCCCCHHHCCCCCCCCHHHHHCCCCCCCCCCC
GNPPNPPEHIAMLSFTRMLAGPMDFTPGIFDMSFNGLGDNTNRPQSTLAKQLALYVVLYS
CCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHEECC
PIQMAADLPENYLKRPDAFQFIKDVPTDWEQSIALDGAVGDFVVMARKERKARQYSGNDW
HHHHHHCCCHHHHCCCCHHHHHHHCCCCHHHHEEECCCCCCEEEEEHHHHHHHHCCCCCE
YLGAVTDENARDVTVKLDFLEPGKTFEAQIYQDGKDAEWKWRPYEMDIKKQTVRKGDTLS
EEEEEECCCCCEEEEEEEEECCCCCEEEEEEECCCCCCEEECCEECCHHHHHHCCCCEEE
LHLAEGGGAAVRLKAL
EEEECCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA