| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is ysnE [H]
Identifier: 119774243
GI number: 119774243
Start: 1341377
End: 1341832
Strand: Reverse
Name: ysnE [H]
Synonym: Sama_1106
Alternate gene names: 119774243
Gene position: 1341832-1341377 (Counterclockwise)
Preceding gene: 119774245
Following gene: 119774242
Centisome position: 31.16
GC content: 58.55
Gene sequence:
>456_bases ATGAATATCAAGCTTGACGATTTAAGCCACCCGGCGGTTGCCAGATTACTGCACGAACATCTGGAAGACATGTACGACAA CTCCCCCGCAGACAGCGTGCACGCGCTTGACCTGGCCCGTCTCAAGCAACGTGATATCCGTTTTTATACCCTGTGGCAGG GCAATACCCTCGCCGCCTGCGGCGCCGTGAAGCAGGTGGACTTTCACAGCGGCGAAATCAAATCCATGCGGGCCACCCGC GCGCTGCGCGGTCGCGGTTTTGGCCATGCCATGCTGATGCATCTGGAAAACGAAAGTCGTCGCCTCGGCTTTAAACGCCT GTATCTGGAAACCGGCACCGCCGATTACTTCCTGCCCGCGCAGCGGCTGTACCTGGCCCACGGCTTTGAGGTCTGTGCCC CCTTTGGGCATTACCGCGAAGATCCCCACAGCCTGTTTATGACCAAGGCCCTGTGA
Upstream 100 bases:
>100_bases GCACAGATCCACCAATAAAAACCTATATCTATCAATACCCTGAATTCAGGCACAGCCTTTGCTTTGTCAAATCGGATGTC ATTATTCAGGAGTATTAGGG
Downstream 100 bases:
>100_bases GCCACATCAACAGGTTCATCAAGTCTCTGATGCTATTCATCAAGCCTCTGGCAGGTTCACCAAGCCAGCGGGGCTTGGTG AAACCTTATGCGATTCACTC
Product: histone acetyltransferase HPA2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MNIKLDDLSHPAVARLLHEHLEDMYDNSPADSVHALDLARLKQRDIRFYTLWQGNTLAACGAVKQVDFHSGEIKSMRATR ALRGRGFGHAMLMHLENESRRLGFKRLYLETGTADYFLPAQRLYLAHGFEVCAPFGHYREDPHSLFMTKAL
Sequences:
>Translated_151_residues MNIKLDDLSHPAVARLLHEHLEDMYDNSPADSVHALDLARLKQRDIRFYTLWQGNTLAACGAVKQVDFHSGEIKSMRATR ALRGRGFGHAMLMHLENESRRLGFKRLYLETGTADYFLPAQRLYLAHGFEVCAPFGHYREDPHSLFMTKAL >Mature_151_residues MNIKLDDLSHPAVARLLHEHLEDMYDNSPADSVHALDLARLKQRDIRFYTLWQGNTLAACGAVKQVDFHSGEIKSMRATR ALRGRGFGHAMLMHLENESRRLGFKRLYLETGTADYFLPAQRLYLAHGFEVCAPFGHYREDPHSLFMTKAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788242, Length=150, Percent_Identity=42.6666666666667, Blast_Score=125, Evalue=8e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 17299; Mature: 17299
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKLDDLSHPAVARLLHEHLEDMYDNSPADSVHALDLARLKQRDIRFYTLWQGNTLAAC CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCCEEEEC GAVKQVDFHSGEIKSMRATRALRGRGFGHAMLMHLENESRRLGFKRLYLETGTADYFLPA CCEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHCCCEEEEEECCCCCEEHHH QRLYLAHGFEVCAPFGHYREDPHSLFMTKAL HHHHHHCCHHHHCCCCCCCCCHHHEEEECCC >Mature Secondary Structure MNIKLDDLSHPAVARLLHEHLEDMYDNSPADSVHALDLARLKQRDIRFYTLWQGNTLAAC CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCCEEEEC GAVKQVDFHSGEIKSMRATRALRGRGFGHAMLMHLENESRRLGFKRLYLETGTADYFLPA CCEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHCCCEEEEEECCCCCEEHHH QRLYLAHGFEVCAPFGHYREDPHSLFMTKAL HHHHHHCCHHHHCCCCCCCCCHHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969504; 9384377 [H]