The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774216

Identifier: 119774216

GI number: 119774216

Start: 1307198

End: 1307464

Strand: Direct

Name: 119774216

Synonym: Sama_1079

Alternate gene names: NA

Gene position: 1307198-1307464 (Clockwise)

Preceding gene: 119774215

Following gene: 119774218

Centisome position: 30.36

GC content: 44.57

Gene sequence:

>267_bases
TTGCCAGAGATGTTCAAGTCAGTCACAAGTGCCTGTTCAATGCGCCAGCAACAAGCCTATGCTGAAAGGGAGAATGATGA
TGAACTTTACCCATGCAGCTGTCGATTGATGTCGACTGCAAAAATTCGGTTCACTTATTCAGACCGGGCCTTTTTCAAGA
AGTTCATCGTCAGCGTAAAAAATTCAAAAAAAATTTTTCCCGGTGCAAAAGTCAATTATCCCGGTGGCCATCCCGGTGGC
GATTATGACCTGTCACTGCACATTTGA

Upstream 100 bases:

>100_bases
GCGGTGTAACGTCATTCATGTGTCGCAGCGCCGCTGCTTAGAGCAAGCGTGCAGTGAGTCGGGTGTGTGGGTTTCAGGAT
AAAAAAAAGGCAACCAATGG

Downstream 100 bases:

>100_bases
GGAATAAAAAAAGGCAACCTGGGGAGGTTGCCATGGGATCCTTCAGTGGACCAAGGGGACTGCGCTAGTAAGTCCCAGGG
AGAATGATGAACACGAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MPEMFKSVTSACSMRQQQAYAERENDDELYPCSCRLMSTAKIRFTYSDRAFFKKFIVSVKNSKKIFPGAKVNYPGGHPGG
DYDLSLHI

Sequences:

>Translated_88_residues
MPEMFKSVTSACSMRQQQAYAERENDDELYPCSCRLMSTAKIRFTYSDRAFFKKFIVSVKNSKKIFPGAKVNYPGGHPGG
DYDLSLHI
>Mature_87_residues
PEMFKSVTSACSMRQQQAYAERENDDELYPCSCRLMSTAKIRFTYSDRAFFKKFIVSVKNSKKIFPGAKVNYPGGHPGGD
YDLSLHI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10037; Mature: 9905

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEMFKSVTSACSMRQQQAYAERENDDELYPCSCRLMSTAKIRFTYSDRAFFKKFIVSVK
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEEECCHHHHHHHHHHHC
NSKKIFPGAKVNYPGGHPGGDYDLSLHI
CCCEECCCCEECCCCCCCCCCEEEEEEC
>Mature Secondary Structure 
PEMFKSVTSACSMRQQQAYAERENDDELYPCSCRLMSTAKIRFTYSDRAFFKKFIVSVK
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEEECCHHHHHHHHHHHC
NSKKIFPGAKVNYPGGHPGGDYDLSLHI
CCCEECCCCEECCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA