Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is pstS [H]

Identifier: 119774213

GI number: 119774213

Start: 1303044

End: 1304015

Strand: Direct

Name: pstS [H]

Synonym: Sama_1076

Alternate gene names: 119774213

Gene position: 1303044-1304015 (Clockwise)

Preceding gene: 119774212

Following gene: 119774215

Centisome position: 30.26

GC content: 53.5

Gene sequence:

>972_bases
ATGAAACTGAAACAGCTTGTCGGCGCCATGACCCTGACCGCCGCCGGTTTATTCACCGCCGCCGCCTCGGCTGCACTGGA
CCCAGCCCTGCACACCTACGAAAAAACCAGTGGTGTGTCTGGTAACCTGTCGTCTGTAGGCTCTGATACTCTGGCCAACA
TGATGACCCTGTGGGCTGAAGAGTTCAAAACCATCTACCCTAACGTGAACATTCAAATTCAGGCTGCCGGCTCTTCTACT
GCGCCACCAGCCCTGACGGAAGGCACGTCTCAGTTCGGCCCTATGAGCCGCAAGATGAAGCCAAACGAAGTGGAAGCCTT
CGAAAAACACTATGGTTACAAGCCAACAGAAATCCGTGTAGCCATCGACGCCCTGGCGGTGTTTGTGCACAAGGATAACC
CAATCAAGGGCCTGACCATCGAGCAACTGGATGGCATCTTCTCTTCTACCCATAAGTGTGGTGGCAACGATGTAGCTCGC
TGGGGTGACCTGGGTCTGGACAGCAGCTGGGCTGCCAAAGACATCCAGCTGTACGGTCGTAACTCTGTATCCGGTACCTA
CGGTTACTTCAAAGAGAAAGGTCTGTGTAAGGGTGACTTCAAGGCTAACGTGAACGAACAGCCTGGCTCTGCCTCTGTTG
TGCAGTCAGTGTCTCAGTCACTGAATGCCATCGGATACTCAGGCATTGGTTACAAGACTGCCGGTGTGAAAGCCGTTGCT
CTGGCCAAGAAAGGCAACGAGTTTATCGACGCCAGCATCGAGAACGCTGCCAACGGTACTTACCCTCTGTCACGTTACCT
CTACGTGTACGTGAACAAGCATCCCAACAAGGACCTGGCACCAATGGAGCGTGAGTTCATCCGCTATGTGCTGTCAAAGC
AAGGTCAAATGGTTGTTGAGAAAGACGGCTACATTCCGCTGCCAGCCAGCGTAATTGCCAAAGACCTGGAAAAGGCCGGT
ATCCGCCTGTAA

Upstream 100 bases:

>100_bases
GTCGTGTCATCTAAGTGTCACATCAGAGTCATAGACTTGTCATTGTGGCAGTTGATACTGGCTGCGTCTTAAGAAAAAAT
GGTTCAACACTGGAGCAATT

Downstream 100 bases:

>100_bases
CAGTTCTGCCGATCAAAACGCCTCCCTCGGGAGGCGTTTTTGTTTTGAAGCGATAACAGATTGCGCGAAGCAGGCAAAAA
AAACGGCTCCCAATGGGAGC

Product: phosphate-binding protein

Products: NA

Alternate protein names: PBP [H]

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKLKQLVGAMTLTAAGLFTAAASAALDPALHTYEKTSGVSGNLSSVGSDTLANMMTLWAEEFKTIYPNVNIQIQAAGSST
APPALTEGTSQFGPMSRKMKPNEVEAFEKHYGYKPTEIRVAIDALAVFVHKDNPIKGLTIEQLDGIFSSTHKCGGNDVAR
WGDLGLDSSWAAKDIQLYGRNSVSGTYGYFKEKGLCKGDFKANVNEQPGSASVVQSVSQSLNAIGYSGIGYKTAGVKAVA
LAKKGNEFIDASIENAANGTYPLSRYLYVYVNKHPNKDLAPMEREFIRYVLSKQGQMVVEKDGYIPLPASVIAKDLEKAG
IRL

Sequences:

>Translated_323_residues
MKLKQLVGAMTLTAAGLFTAAASAALDPALHTYEKTSGVSGNLSSVGSDTLANMMTLWAEEFKTIYPNVNIQIQAAGSST
APPALTEGTSQFGPMSRKMKPNEVEAFEKHYGYKPTEIRVAIDALAVFVHKDNPIKGLTIEQLDGIFSSTHKCGGNDVAR
WGDLGLDSSWAAKDIQLYGRNSVSGTYGYFKEKGLCKGDFKANVNEQPGSASVVQSVSQSLNAIGYSGIGYKTAGVKAVA
LAKKGNEFIDASIENAANGTYPLSRYLYVYVNKHPNKDLAPMEREFIRYVLSKQGQMVVEKDGYIPLPASVIAKDLEKAG
IRL
>Mature_323_residues
MKLKQLVGAMTLTAAGLFTAAASAALDPALHTYEKTSGVSGNLSSVGSDTLANMMTLWAEEFKTIYPNVNIQIQAAGSST
APPALTEGTSQFGPMSRKMKPNEVEAFEKHYGYKPTEIRVAIDALAVFVHKDNPIKGLTIEQLDGIFSSTHKCGGNDVAR
WGDLGLDSSWAAKDIQLYGRNSVSGTYGYFKEKGLCKGDFKANVNEQPGSASVVQSVSQSLNAIGYSGIGYKTAGVKAVA
LAKKGNEFIDASIENAANGTYPLSRYLYVYVNKHPNKDLAPMEREFIRYVLSKQGQMVVEKDGYIPLPASVIAKDLEKAG
IRL

Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pstS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011862 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34721; Mature: 34721

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKQLVGAMTLTAAGLFTAAASAALDPALHTYEKTSGVSGNLSSVGSDTLANMMTLWAE
CCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHH
EFKTIYPNVNIQIQAAGSSTAPPALTEGTSQFGPMSRKMKPNEVEAFEKHYGYKPTEIRV
HHHHHCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEE
AIDALAVFVHKDNPIKGLTIEQLDGIFSSTHKCGGNDVARWGDLGLDSSWAAKDIQLYGR
EEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCEEEECC
NSVSGTYGYFKEKGLCKGDFKANVNEQPGSASVVQSVSQSLNAIGYSGIGYKTAGVKAVA
CCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCEEEE
LAKKGNEFIDASIENAANGTYPLSRYLYVYVNKHPNKDLAPMEREFIRYVLSKQGQMVVE
EECCCCHHCCCHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEE
KDGYIPLPASVIAKDLEKAGIRL
CCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKLKQLVGAMTLTAAGLFTAAASAALDPALHTYEKTSGVSGNLSSVGSDTLANMMTLWAE
CCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHH
EFKTIYPNVNIQIQAAGSSTAPPALTEGTSQFGPMSRKMKPNEVEAFEKHYGYKPTEIRV
HHHHHCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEE
AIDALAVFVHKDNPIKGLTIEQLDGIFSSTHKCGGNDVARWGDLGLDSSWAAKDIQLYGR
EEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCEEEECC
NSVSGTYGYFKEKGLCKGDFKANVNEQPGSASVVQSVSQSLNAIGYSGIGYKTAGVKAVA
CCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCEEEE
LAKKGNEFIDASIENAANGTYPLSRYLYVYVNKHPNKDLAPMEREFIRYVLSKQGQMVVE
EECCCCHHCCCHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEE
KDGYIPLPASVIAKDLEKAGIRL
CCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA