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The map label for this gene is yqaA [C]

Identifier: 119774193

GI number: 119774193

Start: 1277977

End: 1278393

Strand: Direct

Name: yqaA [C]

Synonym: Sama_1056

Alternate gene names: 119774193

Gene position: 1277977-1278393 (Clockwise)

Preceding gene: 119774190

Following gene: 119774194

Centisome position: 29.68

GC content: 58.03

Gene sequence:

>417_bases
ATGGAGCCTCTGTGGCTGATGTTTTCCGGCGCCTTTCTGGCGGCCACCCTGTTGCCGGGCGGTTCTGAGGTACTTTTGCT
GGCGCTGGTGAACTCCAACCCCGAGCTGTGGTTTTCCCTGTTTGTGGTGGCAACCCTGGGAAATACCCTCGGGGCACTCA
CGAGCTTGGGACTGGGCTGCCTTGGCCGGGTCGCCTGGGAGCCCGAACAGTTGTCCCGTTCCCAGCGCCGTGCCCTGGCC
TTGGTGGAGAAGTACGGGGTCTGGAGTCTGCTGTTGTCCTGGGCTCCTGTCATTGGTGACATTCTTTGTGTGCTGGCAGG
TTGGCTCCGGCTGCCGCTCTTCATGTCTATTATTCTGATTTTAATTGGAAAAGGTGCCCGCTATGGTCTGCTTCTATTGA
TGATGCAGGCCTTTTGA

Upstream 100 bases:

>100_bases
AAACAAACCGTTTTTGATATAACTTATTGTGATATCAGTATTTGTTTTTATAGCGTTAACTCTATCTATTTTTATTAACC
TGGCTTTTGGGAGTCGAACG

Downstream 100 bases:

>100_bases
CATTTTTTATTACAACACTGTTGGCAAAAGCCTGATGGGCCTTTTTATGAGTCTGATATAGTCGGGCGTTGTTATTGGTT
AACTAACTACAAGTAAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MEPLWLMFSGAFLAATLLPGGSEVLLLALVNSNPELWFSLFVVATLGNTLGALTSLGLGCLGRVAWEPEQLSRSQRRALA
LVEKYGVWSLLLSWAPVIGDILCVLAGWLRLPLFMSIILILIGKGARYGLLLLMMQAF

Sequences:

>Translated_138_residues
MEPLWLMFSGAFLAATLLPGGSEVLLLALVNSNPELWFSLFVVATLGNTLGALTSLGLGCLGRVAWEPEQLSRSQRRALA
LVEKYGVWSLLLSWAPVIGDILCVLAGWLRLPLFMSIILILIGKGARYGLLLLMMQAF
>Mature_138_residues
MEPLWLMFSGAFLAATLLPGGSEVLLLALVNSNPELWFSLFVVATLGNTLGALTSLGLGCLGRVAWEPEQLSRSQRRALA
LVEKYGVWSLLLSWAPVIGDILCVLAGWLRLPLFMSIILILIGKGARYGLLLLMMQAF

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqaA [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=122, Percent_Identity=44.2622950819672, Blast_Score=92, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 15016; Mature: 15016

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPLWLMFSGAFLAATLLPGGSEVLLLALVNSNPELWFSLFVVATLGNTLGALTSLGLGC
CCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGRVAWEPEQLSRSQRRALALVEKYGVWSLLLSWAPVIGDILCVLAGWLRLPLFMSIILI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGKGARYGLLLLMMQAF
HHCCCCHHHHHHHHHHHC
>Mature Secondary Structure
MEPLWLMFSGAFLAATLLPGGSEVLLLALVNSNPELWFSLFVVATLGNTLGALTSLGLGC
CCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGRVAWEPEQLSRSQRRALALVEKYGVWSLLLSWAPVIGDILCVLAGWLRLPLFMSIILI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGKGARYGLLLLMMQAF
HHCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]