Click here to switch to the map view.

The map label for this gene is oadB [H]

Identifier: 119774190

GI number: 119774190

Start: 1274973

End: 1276103

Strand: Direct

Name: oadB [H]

Synonym: Sama_1053

Alternate gene names: 119774190

Gene position: 1274973-1276103 (Clockwise)

Preceding gene: 119774189

Following gene: 119774193

Centisome position: 29.61

GC content: 56.23

Gene sequence:

>1131_bases
ATGGAAGGATTGATGGCTTTTTGGGCCGAAACGGGTATTGCCCACTTTACCCTGGGGCAGCTACTGATGATGGCGGTGGG
ACTGGTGCTCTTATACCTGGCCATTGCCAAGGGATTTGAGCCGCTGTTGCTGTTGCCCATAGGTTTTGGCGCAGTGCTTG
CCAATATCCCCAATGCCGGATTTACCGAGGAGGGGGGCTTACTCTATTACCTCTATCACGTTGGACTCGAGACAGGCATC
TTCCCGCTGCTGATTTTCCTCGGTGTAGGGGCATTAACGGACTTTGGTGCTTTGATTGCCAACCCCAAAACACTGCTTTT
GGGGGCTGCGGCCCAGTTCGGTATTTTCGCCACCTTGCTCGGCGCCATTGCGCTCAATCTGGTACCCGGGTTTGAGTTTT
CCATGAAGGATGCGGCGGCCATTGCGATTATTGGTGGCGCCGACGGACCCACGGCTATTTTCCTCTCTACCAAGCTGGCG
CCAGAGCTTCTGGGAGCCATTGCGGTGGCCGCTTACTCCTACATGGCACTGGTACCCATTATCCAGCCGCCCATTATGCG
GGCGCTCACCACCAAGGAAGAGCGCGCCATCAAGATGGAGCAGCTGCGGGAAGTGAGCAAAAAAGAAAAGGTGCTGTTTC
CCTTAATGGTACTGGGACTGACCACTTTGTTTTTGCCCGCAGCGACACCGCTTGTTGGTATGTTCTGCCTTGGCAACCTG
ATGCGTGAGTCCGGTGTGGTGGACCGTCTCTCTAACACAGCGCAAAACGAGCTTATCAATATAGTCACCATCTTCCTGGG
GTTGGCGGTGGGCTCCAAGCTCTCGGCCGAGCAATTTTTGCGGGTAGAGACTCTTGGGATTCTGGTGCTTGGCGCCGTAG
CCTTCTCCATTGGCACCGCGGCTGGTGTGCTGATGGCAAAGGTGCTCTGCAAGCTCAGTGGTGGCAAGGTCAATCCGCTG
ATTGGTGCAGCAGGTGTGTCTGCGGTGCCTATGGCTGCAAGGGTAGCCAACAAGGTGGGACTTGAGGCGAATCCGCACAA
TTATCTGCTGATGCACGCCATGGGGCCCAATGTGGCCGGTGTGCTCGGCAGTGCGGTGGCTGCCGGTATCTTGCTCGCAG
TATTGGGGTAG

Upstream 100 bases:

>100_bases
CCGTGCCCAGGCCGACGGGGTTATTGCCCGTCTATGGGTGAAAGAAGGCGACTCGGTTGCCGTTGGCGCTCAGCTGTTGT
CGTTGGCCTAAGGAGGCATC

Downstream 100 bases:

>100_bases
CGGTCAATGCAATAAAAAAAGCGCCTGAGGGCGCTTTTTTATTGCAGGCTATTACTGAACCCGGGTCAGCCATAGCAGGA
GCGTCATCAGGACAATCAGG

Product: oxaloacetate decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MEGLMAFWAETGIAHFTLGQLLMMAVGLVLLYLAIAKGFEPLLLLPIGFGAVLANIPNAGFTEEGGLLYYLYHVGLETGI
FPLLIFLGVGALTDFGALIANPKTLLLGAAAQFGIFATLLGAIALNLVPGFEFSMKDAAAIAIIGGADGPTAIFLSTKLA
PELLGAIAVAAYSYMALVPIIQPPIMRALTTKEERAIKMEQLREVSKKEKVLFPLMVLGLTTLFLPAATPLVGMFCLGNL
MRESGVVDRLSNTAQNELINIVTIFLGLAVGSKLSAEQFLRVETLGILVLGAVAFSIGTAAGVLMAKVLCKLSGGKVNPL
IGAAGVSAVPMAARVANKVGLEANPHNYLLMHAMGPNVAGVLGSAVAAGILLAVLG

Sequences:

>Translated_376_residues
MEGLMAFWAETGIAHFTLGQLLMMAVGLVLLYLAIAKGFEPLLLLPIGFGAVLANIPNAGFTEEGGLLYYLYHVGLETGI
FPLLIFLGVGALTDFGALIANPKTLLLGAAAQFGIFATLLGAIALNLVPGFEFSMKDAAAIAIIGGADGPTAIFLSTKLA
PELLGAIAVAAYSYMALVPIIQPPIMRALTTKEERAIKMEQLREVSKKEKVLFPLMVLGLTTLFLPAATPLVGMFCLGNL
MRESGVVDRLSNTAQNELINIVTIFLGLAVGSKLSAEQFLRVETLGILVLGAVAFSIGTAAGVLMAKVLCKLSGGKVNPL
IGAAGVSAVPMAARVANKVGLEANPHNYLLMHAMGPNVAGVLGSAVAAGILLAVLG
>Mature_376_residues
MEGLMAFWAETGIAHFTLGQLLMMAVGLVLLYLAIAKGFEPLLLLPIGFGAVLANIPNAGFTEEGGLLYYLYHVGLETGI
FPLLIFLGVGALTDFGALIANPKTLLLGAAAQFGIFATLLGAIALNLVPGFEFSMKDAAAIAIIGGADGPTAIFLSTKLA
PELLGAIAVAAYSYMALVPIIQPPIMRALTTKEERAIKMEQLREVSKKEKVLFPLMVLGLTTLFLPAATPLVGMFCLGNL
MRESGVVDRLSNTAQNELINIVTIFLGLAVGSKLSAEQFLRVETLGILVLGAVAFSIGTAAGVLMAKVLCKLSGGKVNPL
IGAAGVSAVPMAARVANKVGLEANPHNYLLMHAMGPNVAGVLGSAVAAGILLAVLG

Specific function: Lyase and sodium transporter [H]

COG id: COG1883

COG function: function code C; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gcdB/mmdB/oadB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005661 [H]

Pfam domain/function: PF03977 OAD_beta [H]

EC number: =4.1.1.3 [H]

Molecular weight: Translated: 38924; Mature: 38924

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGLMAFWAETGIAHFTLGQLLMMAVGLVLLYLAIAKGFEPLLLLPIGFGAVLANIPNAG
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCC
FTEEGGLLYYLYHVGLETGIFPLLIFLGVGALTDFGALIANPKTLLLGAAAQFGIFATLL
CCCCCCEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHH
GAIALNLVPGFEFSMKDAAAIAIIGGADGPTAIFLSTKLAPELLGAIAVAAYSYMALVPI
HHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
IQPPIMRALTTKEERAIKMEQLREVSKKEKVLFPLMVLGLTTLFLPAATPLVGMFCLGNL
HCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MRESGVVDRLSNTAQNELINIVTIFLGLAVGSKLSAEQFLRVETLGILVLGAVAFSIGTA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AGVLMAKVLCKLSGGKVNPLIGAAGVSAVPMAARVANKVGLEANPHNYLLMHAMGPNVAG
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHH
VLGSAVAAGILLAVLG
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEGLMAFWAETGIAHFTLGQLLMMAVGLVLLYLAIAKGFEPLLLLPIGFGAVLANIPNAG
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCC
FTEEGGLLYYLYHVGLETGIFPLLIFLGVGALTDFGALIANPKTLLLGAAAQFGIFATLL
CCCCCCEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHH
GAIALNLVPGFEFSMKDAAAIAIIGGADGPTAIFLSTKLAPELLGAIAVAAYSYMALVPI
HHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
IQPPIMRALTTKEERAIKMEQLREVSKKEKVLFPLMVLGLTTLFLPAATPLVGMFCLGNL
HCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MRESGVVDRLSNTAQNELINIVTIFLGLAVGSKLSAEQFLRVETLGILVLGAVAFSIGTA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AGVLMAKVLCKLSGGKVNPLIGAAGVSAVPMAARVANKVGLEANPHNYLLMHAMGPNVAG
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHH
VLGSAVAAGILLAVLG
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]