Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is recX [H]

Identifier: 119774184

GI number: 119774184

Start: 1266581

End: 1267018

Strand: Direct

Name: recX [H]

Synonym: Sama_1047

Alternate gene names: 119774184

Gene position: 1266581-1267018 (Clockwise)

Preceding gene: 119774183

Following gene: 119774185

Centisome position: 29.41

GC content: 51.6

Gene sequence:

>438_bases
ATGAATCACGCGCTGGCATCCCTTGCCAGGCGTGATCACAGCCGCAATGAACTCAAGCTTAAATTGCTCGCCAAAGGACA
CAATGCCCTGGACATTGAGCGGGTGCTGGATGAGTGTGAAGCTAAAGGCTACCTGAATGACAGTCGTTATGGAGCATCAG
TCGTTCGCTCATCGGTACTGAAAGGTCATGGCGCTGCCAGAGCGCGCCAGGCAATGATAGCCAAGGGATTGGATAAAGAG
GTTATTCAACACAATCTGGAAGGTTGCGAGGTGGATTGGTATGCCCAGGCCCGGGCTAAGGCGCTGAAAAAATTTGGTGC
GACCAAACCTGTCGATGCCAAGGACAGGGCAAAGCGTATACGCTATCTTGCCGGACAAGGATTCAGTTTTGACGAGATTG
CCCACGCTCTGGATTTTGACCCTTACGATATGGAATGA

Upstream 100 bases:

>100_bases
TGCTGCTGTCACACAGCTCATCTTCCGGTAGTGCCGATGAAGTAGAAGGCGATGAAAACATCGACTTCGAAACCGGAGAA
GTGTTCTGAATCAGGACCTG

Downstream 100 bases:

>100_bases
AGACCGCAACCGATGCGGTCTTTTTGTATCTGCCTTTCTGTTCTTCCTTAGCGTTTTTTACCTTGGCCCTGTCCTTTGTT
TGCCTCGGATTTCGCGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MNHALASLARRDHSRNELKLKLLAKGHNALDIERVLDECEAKGYLNDSRYGASVVRSSVLKGHGAARARQAMIAKGLDKE
VIQHNLEGCEVDWYAQARAKALKKFGATKPVDAKDRAKRIRYLAGQGFSFDEIAHALDFDPYDME

Sequences:

>Translated_145_residues
MNHALASLARRDHSRNELKLKLLAKGHNALDIERVLDECEAKGYLNDSRYGASVVRSSVLKGHGAARARQAMIAKGLDKE
VIQHNLEGCEVDWYAQARAKALKKFGATKPVDAKDRAKRIRYLAGQGFSFDEIAHALDFDPYDME
>Mature_145_residues
MNHALASLARRDHSRNELKLKLLAKGHNALDIERVLDECEAKGYLNDSRYGASVVRSSVLKGHGAARARQAMIAKGLDKE
VIQHNLEGCEVDWYAQARAKALKKFGATKPVDAKDRAKRIRYLAGQGFSFDEIAHALDFDPYDME

Specific function: Modulates recA activity [H]

COG id: COG2137

COG function: function code R; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recX family [H]

Homologues:

Organism=Escherichia coli, GI1789050, Length=143, Percent_Identity=37.0629370629371, Blast_Score=91, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003783 [H]

Pfam domain/function: PF02631 RecX [H]

EC number: NA

Molecular weight: Translated: 16195; Mature: 16195

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHALASLARRDHSRNELKLKLLAKGHNALDIERVLDECEAKGYLNDSRYGASVVRSSVL
CCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
KGHGAARARQAMIAKGLDKEVIQHNLEGCEVDWYAQARAKALKKFGATKPVDAKDRAKRI
HCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
RYLAGQGFSFDEIAHALDFDPYDME
HHHHCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNHALASLARRDHSRNELKLKLLAKGHNALDIERVLDECEAKGYLNDSRYGASVVRSSVL
CCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
KGHGAARARQAMIAKGLDKEVIQHNLEGCEVDWYAQARAKALKKFGATKPVDAKDRAKRI
HCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
RYLAGQGFSFDEIAHALDFDPYDME
HHHHCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA