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The map label for this gene is recA [H]

Identifier: 119774183

GI number: 119774183

Start: 1265502

End: 1266569

Strand: Direct

Name: recA [H]

Synonym: Sama_1046

Alternate gene names: 119774183

Gene position: 1265502-1266569 (Clockwise)

Preceding gene: 119774181

Following gene: 119774184

Centisome position: 29.39

GC content: 51.4

Gene sequence:

>1068_bases
ATGAAAATCGATCCAAATAAAGAGAAAGCACTGGCCGCCGTTCTTGGCCAAATTGAAAAGCAATTTGGTAAAGGCTCCAT
CATGAAGCTGGGCGAAGACCGCTCCATGGATGTGGAAACTATCTCCACCGGCTCGCTGTCTCTGGACGTGGCTCTTGGTG
CAGGCGGTCTGCCAATGGGCCGTATCGTAGAAATCTATGGTCCTGAATCATCAGGTAAAACCACCCTGACTCTCGAAGTG
ATTGCTGCGGCTCAGCGCGAAGGCAAAGTGTGTGCCTTTATCGATGCTGAACACGCCCTTGACCCTGTATATGCCCGTAA
GCTCGGTGTAGATATCGATAATCTGCTTTGCTCTCAGCCAGACACAGGTGAACAGGCACTGGAAATCTGTGATGCTTTGA
CCCGCAGTGGTGCCGTTGACGTTATCATCGTGGACTCGGTAGCCGCACTGGTTCCCAAGGCCGAAATCGAAGGTGAAATT
GGCGACTCTCACGTAGGTCTTGCCGCCCGTATGATGAGCCAGGCAATGCGTAAGCTTGCCGGTAACCTCAAGCAGTCCAA
TACCCTGCTGATTTTCATCAACCAAATCCGTATGAAAATTGGTGTGATGTTCGGTAACCCTGAAACCACCACAGGTGGAA
ACGCCCTGAAGTTTTACGCTTCAGTGCGTCTGGATATTCGCCGCACCGGCGCCATTAAAGAAGGCGACGAAGTGGTGGGT
AACGAAACCCGCGTGAAAGTGGTTAAAAACAAGATTGCTGCGCCTTTCCGCCAGGCAGATTTCCAGATCCTCTATGGTCA
GGGAATTAACCGTACCGGCGAGCTGGTCGACCTGGGTGTACTGCACAAGCTGATTGAAAAATCCGGTGCCTGGTACAGCT
ATAAGGGCGACAAGATTGGTCAGGGCCGCGCCAACGCGACCAAGTTCCTGGCTGAAAATACTGAAATTGCAGCCGAAATT
GAAAAGACACTGCGTGAAATGCTGCTGTCACACAGCTCATCTTCCGGTAGTGCCGATGAAGTAGAAGGCGATGAAAACAT
CGACTTCGAAACCGGAGAAGTGTTCTGA

Upstream 100 bases:

>100_bases
CAGTATACTAGCTTTCAATATGTACAAATACACAGGGCTTTTGCCTGAACCGCATTAACCGTTGCGTCTTCACAGCGCTT
GCTGTGTGTGAGAGGGAACA

Downstream 100 bases:

>100_bases
ATCAGGACCTGATGAATCACGCGCTGGCATCCCTTGCCAGGCGTGATCACAGCCGCAATGAACTCAAGCTTAAATTGCTC
GCCAAAGGACACAATGCCCT

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKIDPNKEKALAAVLGQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMGRIVEIYGPESSGKTTLTLEV
IAAAQREGKVCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIIVDSVAALVPKAEIEGEI
GDSHVGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVG
NETRVKVVKNKIAAPFRQADFQILYGQGINRTGELVDLGVLHKLIEKSGAWYSYKGDKIGQGRANATKFLAENTEIAAEI
EKTLREMLLSHSSSSGSADEVEGDENIDFETGEVF

Sequences:

>Translated_355_residues
MKIDPNKEKALAAVLGQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMGRIVEIYGPESSGKTTLTLEV
IAAAQREGKVCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIIVDSVAALVPKAEIEGEI
GDSHVGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVG
NETRVKVVKNKIAAPFRQADFQILYGQGINRTGELVDLGVLHKLIEKSGAWYSYKGDKIGQGRANATKFLAENTEIAAEI
EKTLREMLLSHSSSSGSADEVEGDENIDFETGEVF
>Mature_355_residues
MKIDPNKEKALAAVLGQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMGRIVEIYGPESSGKTTLTLEV
IAAAQREGKVCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIIVDSVAALVPKAEIEGEI
GDSHVGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVG
NETRVKVVKNKIAAPFRQADFQILYGQGINRTGELVDLGVLHKLIEKSGAWYSYKGDKIGQGRANATKFLAENTEIAAEI
EKTLREMLLSHSSSSGSADEVEGDENIDFETGEVF

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=353, Percent_Identity=84.985835694051, Blast_Score=606, Evalue=1e-175,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 38091; Mature: 38091

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDPNKEKALAAVLGQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMG
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCEEEEEEECCCCCCCC
RIVEIYGPESSGKTTLTLEVIAAAQREGKVCAFIDAEHALDPVYARKLGVDIDNLLCSQP
CEEEEECCCCCCCEEEEEEEEEHHHCCCCEEEEEECHHHCCHHHHHHHCCCHHHHHCCCC
DTGEQALEICDALTRSGAVDVIIVDSVAALVPKAEIEGEIGDSHVGLAARMMSQAMRKLA
CCHHHHHHHHHHHHHCCCEEEEEECHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHH
GNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVG
CCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCHHCC
NETRVKVVKNKIAAPFRQADFQILYGQGINRTGELVDLGVLHKLIEKSGAWYSYKGDKIG
CCHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCC
QGRANATKFLAENTEIAAEIEKTLREMLLSHSSSSGSADEVEGDENIDFETGEVF
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKIDPNKEKALAAVLGQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMG
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCEEEEEEECCCCCCCC
RIVEIYGPESSGKTTLTLEVIAAAQREGKVCAFIDAEHALDPVYARKLGVDIDNLLCSQP
CEEEEECCCCCCCEEEEEEEEEHHHCCCCEEEEEECHHHCCHHHHHHHCCCHHHHHCCCC
DTGEQALEICDALTRSGAVDVIIVDSVAALVPKAEIEGEIGDSHVGLAARMMSQAMRKLA
CCHHHHHHHHHHHHHCCCEEEEEECHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHH
GNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVG
CCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCHHCC
NETRVKVVKNKIAAPFRQADFQILYGQGINRTGELVDLGVLHKLIEKSGAWYSYKGDKIG
CCHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCC
QGRANATKFLAENTEIAAEIEKTLREMLLSHSSSSGSADEVEGDENIDFETGEVF
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]