| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
Click here to switch to the map view.
The map label for this gene is mazG [H]
Identifier: 119774171
GI number: 119774171
Start: 1252330
End: 1253157
Strand: Direct
Name: mazG [H]
Synonym: Sama_1034
Alternate gene names: 119774171
Gene position: 1252330-1253157 (Clockwise)
Preceding gene: 119774170
Following gene: 119774172
Centisome position: 29.08
GC content: 55.68
Gene sequence:
>828_bases ATGAGCACCGAAATCATTGCAAATGAAGAGCCAAATGCCGACATCAATCCGCTACTGGCCATCATGGCCAAATTGCGTGA CCCAAAACATGGCTGCCCCTGGGACAAGGCCCAGCGCTTCGAGACCATAGTGCCCTTCACCCTGGAAGAGGCCTATGAAG TGGCCGACACCATTGAGCGCATGGATCTTGATGAGTTGCCGGACGAGCTGGGGGACCTTTTGTTTCAGGTGGTGTTCTAC TGCCAGCTTGGCAAAGAACAGGGGCTGTTTGATTTCGATGAGGTGGTAAAGCGCATCTGCGCCAAGCTCACTTCCCGCCA TCCACATGTGTTTGGCGATATTGAAGTGAGTTCCAGTAAAGAAGTGAAAGACAACTGGGAGGCCATCAAGGCCAGTGAGC GTAAAGCCAAAGACAAACACTCGGTGCTCGATGATGTGCCGGTTGGCCTGCCAGCCCTAAGCCGCGCCGCCAAAATCCAG AAGCGGGTGGCCCGGGTGGGTTTTGACTGGGGCGAGCTGCCGCCGGTGGTGGCCAAGGTGGAAGAAGAAATTGCCGAAGT GCTGGCCGAAGTGCAGGTGGACAGTCCCGACCAGGAGCGGGTTGCCAGTGAGATGGGTGACCTGTTGTTTGCAGTGGTGA ATATGGCGCGCCATCTTGGTGTTGAGCCCGAGCAGGCACTTCGCCGGGCCAATCAAAAGTTTGAACGCCGTTTTCGCGGC GTGGAAGAACTGGCAACCCTGGGAGGCAGACAATTGACCGATTATTCCCTTGCTGAGCTCGATGGCTTCTGGGATCAGGT AAAAGAGCAGGAAAAATCTCCCCGTTGA
Upstream 100 bases:
>100_bases ATGAATACTGAACCTTTCAAATAAGGGCTGCGTTGCAGCCTTTGTTTTTAACGTCTTTTAAGTCATAGCTGCGCTGTTTT CGCAGCAGAAGGGAATGCAA
Downstream 100 bases:
>100_bases GGTTTGTCGAAAGCACAGGGCTTTGATATACTGTCGCCCCGTCCTGGTGCTTTCTTACAAGCACATATTTTCACACTCAT ATTTTCTCAGGTTCAGCATG
Product: nucleoside triphosphate pyrophosphohydrolase
Products: NA
Alternate protein names: NTP-PPase [H]
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MSTEIIANEEPNADINPLLAIMAKLRDPKHGCPWDKAQRFETIVPFTLEEAYEVADTIERMDLDELPDELGDLLFQVVFY CQLGKEQGLFDFDEVVKRICAKLTSRHPHVFGDIEVSSSKEVKDNWEAIKASERKAKDKHSVLDDVPVGLPALSRAAKIQ KRVARVGFDWGELPPVVAKVEEEIAEVLAEVQVDSPDQERVASEMGDLLFAVVNMARHLGVEPEQALRRANQKFERRFRG VEELATLGGRQLTDYSLAELDGFWDQVKEQEKSPR
Sequences:
>Translated_275_residues MSTEIIANEEPNADINPLLAIMAKLRDPKHGCPWDKAQRFETIVPFTLEEAYEVADTIERMDLDELPDELGDLLFQVVFY CQLGKEQGLFDFDEVVKRICAKLTSRHPHVFGDIEVSSSKEVKDNWEAIKASERKAKDKHSVLDDVPVGLPALSRAAKIQ KRVARVGFDWGELPPVVAKVEEEIAEVLAEVQVDSPDQERVASEMGDLLFAVVNMARHLGVEPEQALRRANQKFERRFRG VEELATLGGRQLTDYSLAELDGFWDQVKEQEKSPR >Mature_274_residues STEIIANEEPNADINPLLAIMAKLRDPKHGCPWDKAQRFETIVPFTLEEAYEVADTIERMDLDELPDELGDLLFQVVFYC QLGKEQGLFDFDEVVKRICAKLTSRHPHVFGDIEVSSSKEVKDNWEAIKASERKAKDKHSVLDDVPVGLPALSRAAKIQK RVARVGFDWGELPPVVAKVEEEIAEVLAEVQVDSPDQERVASEMGDLLFAVVNMARHLGVEPEQALRRANQKFERRFRGV EELATLGGRQLTDYSLAELDGFWDQVKEQEKSPR
Specific function: Involved in the regulation of bacterial cell survival under conditions of nutritional stress. Regulates the MazEF toxin- antitoxin (TA) module that mediates programmed cell death (PCD). This is achieved by lowering the cellular concentration of (p)ppGpp p
COG id: COG1694
COG function: function code R; Predicted pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nucleoside triphosphate pyrophosphohydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1789144, Length=257, Percent_Identity=56.8093385214008, Blast_Score=293, Evalue=6e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004518 - InterPro: IPR011551 [H]
Pfam domain/function: PF03819 MazG [H]
EC number: =3.6.1.8 [H]
Molecular weight: Translated: 31127; Mature: 30995
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEIIANEEPNADINPLLAIMAKLRDPKHGCPWDKAQRFETIVPFTLEEAYEVADTIER CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH MDLDELPDELGDLLFQVVFYCQLGKEQGLFDFDEVVKRICAKLTSRHPHVFGDIEVSSSK CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEECEECCCCC EVKDNWEAIKASERKAKDKHSVLDDVPVGLPALSRAAKIQKRVARVGFDWGELPPVVAKV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH EEEIAEVLAEVQVDSPDQERVASEMGDLLFAVVNMARHLGVEPEQALRRANQKFERRFRG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH VEELATLGGRQLTDYSLAELDGFWDQVKEQEKSPR HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STEIIANEEPNADINPLLAIMAKLRDPKHGCPWDKAQRFETIVPFTLEEAYEVADTIER CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH MDLDELPDELGDLLFQVVFYCQLGKEQGLFDFDEVVKRICAKLTSRHPHVFGDIEVSSSK CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEECEECCCCC EVKDNWEAIKASERKAKDKHSVLDDVPVGLPALSRAAKIQKRVARVGFDWGELPPVVAKV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH EEEIAEVLAEVQVDSPDQERVASEMGDLLFAVVNMARHLGVEPEQALRRANQKFERRFRG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH VEELATLGGRQLTDYSLAELDGFWDQVKEQEKSPR HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]