Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774140

Identifier: 119774140

GI number: 119774140

Start: 1214831

End: 1215073

Strand: Direct

Name: 119774140

Synonym: Sama_1003

Alternate gene names: NA

Gene position: 1214831-1215073 (Clockwise)

Preceding gene: 119774138

Following gene: 119774142

Centisome position: 28.21

GC content: 53.09

Gene sequence:

>243_bases
ATGATGCTGGAATGGGTCGCGACAGATAAGGGAAATCAGGTCATTGAAAGCCTCAAGGCGGAGGGGTGGCGGGTAAAAGC
CCAGTACAGCCCCTTTGCCTTTGACAAAGGCATCGATTATGACAGCTACGAGCTGGTAAGAGCCGGTGATACCTTGAAAC
TGGAGTGGGACAACTGGCTCGAATGGCGCCTTTGCGGTTCGGCAACCCTGTTGCAGTCGCTGAAACAGCGCTTTGAACTC
TAA

Upstream 100 bases:

>100_bases
TTAGGCCCGTGAAAAGGGTGAACAGTGCAGCAGTCAAACTTGGTGAGTCTGAACGTATTTTGGATGCAGCAGATTTGCTC
GCAGGCAAAGGAGAAATGCC

Downstream 100 bases:

>100_bases
CTGGTCTATTGGCAGCTTCAGCACGCGACATTTTCCTGCTCAGATGAAAGCACTCAGGTGGTTTTGGGCGCTCTCGGTCC
ATCTACCCTTAGGGTTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MMLEWVATDKGNQVIESLKAEGWRVKAQYSPFAFDKGIDYDSYELVRAGDTLKLEWDNWLEWRLCGSATLLQSLKQRFEL

Sequences:

>Translated_80_residues
MMLEWVATDKGNQVIESLKAEGWRVKAQYSPFAFDKGIDYDSYELVRAGDTLKLEWDNWLEWRLCGSATLLQSLKQRFEL
>Mature_80_residues
MMLEWVATDKGNQVIESLKAEGWRVKAQYSPFAFDKGIDYDSYELVRAGDTLKLEWDNWLEWRLCGSATLLQSLKQRFEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9390; Mature: 9390

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLEWVATDKGNQVIESLKAEGWRVKAQYSPFAFDKGIDYDSYELVRAGDTLKLEWDNWL
CEEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEECCCEEEEECCCCE
EWRLCGSATLLQSLKQRFEL
EEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure
MMLEWVATDKGNQVIESLKAEGWRVKAQYSPFAFDKGIDYDSYELVRAGDTLKLEWDNWL
CEEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEECCCEEEEECCCCE
EWRLCGSATLLQSLKQRFEL
EEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA