Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774116

Identifier: 119774116

GI number: 119774116

Start: 1183073

End: 1184050

Strand: Direct

Name: 119774116

Synonym: Sama_0979

Alternate gene names: NA

Gene position: 1183073-1184050 (Clockwise)

Preceding gene: 119774115

Following gene: 119774118

Centisome position: 27.47

GC content: 54.6

Gene sequence:

>978_bases
ATGACAGCGATTTTGACTCAAGCTTCATCCAACTCTCTGCAAAAAGACACGATTTTCCAGCAATCGTTGTTTTTACCTTA
CGACGGCGGTCAGTTGCACCTGAGGCATATCAGTCCCGCTTCCCCTGCTGCTGCGCGCTCCCCCTTGCTGATGCTTCATG
GTGCCATGTCCAACGGCCGGGTGTTTTACAGTGAGTCCGGGCGGGGGCTGGCGAGCTTTTTGGCCCGGCAGGGGTTTGAG
GTGTATGTCCTCGATACGGCGGGACGGGGCCTCAGTACTCCCAAGCTGTCCAAAGGCGTTGATCCGGGGCAGGGCAAGGT
GATCCGTGAACAGTTACCCCTGGTACAGGCATTCATTCTTGAGCGCCATCCGTTAACGCAGGGGGTACACTGGTGTGGCC
ACTCCTGGGGTGGGGTTCTCATGGCAAGCAGTTTGGTGAGATACCCGGATATGGCCGCCAGGGTACGATCTTTACTGACT
TTTGGCAGCAAAAGAACCATACGAACCCGCTCATTGAAAAAATGGTGGATGGTGGACATGTTCTGGAACCGGCTTGCACC
TGCCATCGCCACACAGCGCGGTTATTTACCCGCCGATAGCCTGAAACTCGGTATGGATAACGAGAGTATCAGTTCCCTGT
GCGAGAGTATCGACTGGGTCCGTGGTGATTGGATAGATCATGATGACGGCTTTGATTACGCAGCAGCCGCAAGGGTTAAA
GGTATACCGCCAGCCTGGTTTATTGCCGGCGCCCGGGATACTGTGCTGGGTAACCCCAGTGATGTGAAAGACATGATGGC
AGAATGCTGCGCTGCTGATGCCCGCTTTACCTTGCTGTCCAGGGCGCATGGATATCGCCACGACTATGACCATGCGGGCA
TGCTGACACATCTTGATGCCCCATCAGATCATTTTATGGAGGTAGCAGACTGGTTGCTTGGTTTTGATATGACGGCGCTC
AAAGACCCGGTTAACTGA

Upstream 100 bases:

>100_bases
CAAGCGTGAACTCCGAGGGTTTGAGTAATTGCTCTTGAGTTTTGTCTGTGCTCTGGTTTAGCCTGATTGAATATAGGCCC
AGGCACAGACCTTGATAACC

Downstream 100 bases:

>100_bases
GGGCGCAATTTACTGACTGAGTGCGCTGAAACGCAGCACAACTTCGTCTGTGACATCCAATAATTCACCTACACCGACAA
TGCGCCACAATTGCTCTTCA

Product: alpha/beta hydrolase fold domain-containing protein

Products: NA

Alternate protein names: Esterase/Lipase; Esterase/Lipase/Thioesterase Family Protein; Alpha/Beta Fold Family Hydrolase; Lipase; Esterase; Alpha/Beta Hydrolase Fold Protein

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MTAILTQASSNSLQKDTIFQQSLFLPYDGGQLHLRHISPASPAAARSPLLMLHGAMSNGRVFYSESGRGLASFLARQGFE
VYVLDTAGRGLSTPKLSKGVDPGQGKVIREQLPLVQAFILERHPLTQGVHWCGHSWGGVLMASSLVRYPDMAARVRSLLT
FGSKRTIRTRSLKKWWMVDMFWNRLAPAIATQRGYLPADSLKLGMDNESISSLCESIDWVRGDWIDHDDGFDYAAAARVK
GIPPAWFIAGARDTVLGNPSDVKDMMAECCAADARFTLLSRAHGYRHDYDHAGMLTHLDAPSDHFMEVADWLLGFDMTAL
KDPVN

Sequences:

>Translated_325_residues
MTAILTQASSNSLQKDTIFQQSLFLPYDGGQLHLRHISPASPAAARSPLLMLHGAMSNGRVFYSESGRGLASFLARQGFE
VYVLDTAGRGLSTPKLSKGVDPGQGKVIREQLPLVQAFILERHPLTQGVHWCGHSWGGVLMASSLVRYPDMAARVRSLLT
FGSKRTIRTRSLKKWWMVDMFWNRLAPAIATQRGYLPADSLKLGMDNESISSLCESIDWVRGDWIDHDDGFDYAAAARVK
GIPPAWFIAGARDTVLGNPSDVKDMMAECCAADARFTLLSRAHGYRHDYDHAGMLTHLDAPSDHFMEVADWLLGFDMTAL
KDPVN
>Mature_324_residues
TAILTQASSNSLQKDTIFQQSLFLPYDGGQLHLRHISPASPAAARSPLLMLHGAMSNGRVFYSESGRGLASFLARQGFEV
YVLDTAGRGLSTPKLSKGVDPGQGKVIREQLPLVQAFILERHPLTQGVHWCGHSWGGVLMASSLVRYPDMAARVRSLLTF
GSKRTIRTRSLKKWWMVDMFWNRLAPAIATQRGYLPADSLKLGMDNESISSLCESIDWVRGDWIDHDDGFDYAAAARVKG
IPPAWFIAGARDTVLGNPSDVKDMMAECCAADARFTLLSRAHGYRHDYDHAGMLTHLDAPSDHFMEVADWLLGFDMTALK
DPVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35921; Mature: 35790

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAILTQASSNSLQKDTIFQQSLFLPYDGGQLHLRHISPASPAAARSPLLMLHGAMSNGR
CCEEEECCCCCCCHHHHHHHHHEECCCCCCEEEEEECCCCCCCHHCCCEEEEEECCCCCE
VFYSESGRGLASFLARQGFEVYVLDTAGRGLSTPKLSKGVDPGQGKVIREQLPLVQAFIL
EEECCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHH
ERHPLTQGVHWCGHSWGGVLMASSLVRYPDMAARVRSLLTFGSKRTIRTRSLKKWWMVDM
HCCCHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
FWNRLAPAIATQRGYLPADSLKLGMDNESISSLCESIDWVRGDWIDHDDGFDYAAAARVK
HHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCC
GIPPAWFIAGARDTVLGNPSDVKDMMAECCAADARFTLLSRAHGYRHDYDHAGMLTHLDA
CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEECCC
PSDHFMEVADWLLGFDMTALKDPVN
CCHHHHHHHHHHHCCCHHHHCCCCC
>Mature Secondary Structure 
TAILTQASSNSLQKDTIFQQSLFLPYDGGQLHLRHISPASPAAARSPLLMLHGAMSNGR
CEEEECCCCCCCHHHHHHHHHEECCCCCCEEEEEECCCCCCCHHCCCEEEEEECCCCCE
VFYSESGRGLASFLARQGFEVYVLDTAGRGLSTPKLSKGVDPGQGKVIREQLPLVQAFIL
EEECCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHH
ERHPLTQGVHWCGHSWGGVLMASSLVRYPDMAARVRSLLTFGSKRTIRTRSLKKWWMVDM
HCCCHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
FWNRLAPAIATQRGYLPADSLKLGMDNESISSLCESIDWVRGDWIDHDDGFDYAAAARVK
HHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCC
GIPPAWFIAGARDTVLGNPSDVKDMMAECCAADARFTLLSRAHGYRHDYDHAGMLTHLDA
CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEECCC
PSDHFMEVADWLLGFDMTALKDPVN
CCHHHHHHHHHHHCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA