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The map label for this gene is yfeN [H]

Identifier: 119774109

GI number: 119774109

Start: 1175591

End: 1176400

Strand: Direct

Name: yfeN [H]

Synonym: Sama_0972

Alternate gene names: 119774109

Gene position: 1175591-1176400 (Clockwise)

Preceding gene: 119774108

Following gene: 119774110

Centisome position: 27.3

GC content: 51.23

Gene sequence:

>810_bases
ATGAAAAACGTTAAAATGATGGCTGTTGCCGCCGCTACTTTTGCTGCTCTGTCTACCGGTGCCGCTCAAGCTGAACAGTT
CTACGGCTTCTCTAACATGTCTGTTAACTACCTGGATTGGACTGCCAAAGCTGAAGAGCGTTCCAATGGTGGTTACGGTG
GCGCCAAAGAAGATTTCGTATACCTCGAAATCGAAGGCGGTGCTGGTTACTCTTGGGGTGACGTATACGGCTTCGTCGAT
CTGGAAAACCCAGAAAACATCAACAAGAGCGAGCGTGACTTCAGCGGTAACCCAGTTACTGACTCTTTCCGTATCGCTGC
CAAAGGTTCTATCGCTGCCAACATCGGTAGCAGCAACTGGAACGTTTACTCTCACCTGTACAGCCTGACTGTTGCCGGCG
AAGGTTTCTTCGACCAGAACCTGGTTGTGGGTGTGAGCTACGACGTGTTCACTGATTCAGGTTTCTGGATCAAGCCATTC
CTCGGCGTACACTACGAAAACCAAACCTTCGCTGGTTCAGGCTTCAACGGCTACATGGCTGGTTGGGTTCTGGGTTACAA
CTTCGAACTGGGTGGCCAGAAGTTCATGGTTACCAACTGGCACGAAACTGAATTCGCCCGTGAAGACCAGTTCCGTGGCA
ACGGTACCCAGTACACTCTGAAGTCTACCGGTCAGAACGGTGCAGTATCTCTGTGGTGGAACGCCACTCAAGAGCTGACC
TTCGGTCTGCAGTATCGCTATGCTGATCACAAGCTGGGCACTGCTGCTTACCACGATGCGGCTATCTTCACTGCCAAGTA
CAACTTCTAA

Upstream 100 bases:

>100_bases
TTCTGCCAATGATATTGTGCTTTCGCACGGGCAAGGTAGAATACCCGGGCAAAATAAAAACGCTGCCTCGAGCAGTAAAC
CTAGATAAATGGGGTTGATG

Downstream 100 bases:

>100_bases
TTGTACTGTGGAGCCGTGCGTTGCACGGCTCCATGCTTAATGCTTAGGTCTTAATCTTTACTCAAGCATGGTTTTATCCC
AAAGAGCATGTTTAAGTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKNVKMMAVAAATFAALSTGAAQAEQFYGFSNMSVNYLDWTAKAEERSNGGYGGAKEDFVYLEIEGGAGYSWGDVYGFVD
LENPENINKSERDFSGNPVTDSFRIAAKGSIAANIGSSNWNVYSHLYSLTVAGEGFFDQNLVVGVSYDVFTDSGFWIKPF
LGVHYENQTFAGSGFNGYMAGWVLGYNFELGGQKFMVTNWHETEFAREDQFRGNGTQYTLKSTGQNGAVSLWWNATQELT
FGLQYRYADHKLGTAAYHDAAIFTAKYNF

Sequences:

>Translated_269_residues
MKNVKMMAVAAATFAALSTGAAQAEQFYGFSNMSVNYLDWTAKAEERSNGGYGGAKEDFVYLEIEGGAGYSWGDVYGFVD
LENPENINKSERDFSGNPVTDSFRIAAKGSIAANIGSSNWNVYSHLYSLTVAGEGFFDQNLVVGVSYDVFTDSGFWIKPF
LGVHYENQTFAGSGFNGYMAGWVLGYNFELGGQKFMVTNWHETEFAREDQFRGNGTQYTLKSTGQNGAVSLWWNATQELT
FGLQYRYADHKLGTAAYHDAAIFTAKYNF
>Mature_269_residues
MKNVKMMAVAAATFAALSTGAAQAEQFYGFSNMSVNYLDWTAKAEERSNGGYGGAKEDFVYLEIEGGAGYSWGDVYGFVD
LENPENINKSERDFSGNPVTDSFRIAAKGSIAANIGSSNWNVYSHLYSLTVAGEGFFDQNLVVGVSYDVFTDSGFWIKPF
LGVHYENQTFAGSGFNGYMAGWVLGYNFELGGQKFMVTNWHETEFAREDQFRGNGTQYTLKSTGQNGAVSLWWNATQELT
FGLQYRYADHKLGTAAYHDAAIFTAKYNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To V.parahaemolyticus ompK [H]

Homologues:

Organism=Escherichia coli, GI1788747, Length=252, Percent_Identity=43.6507936507937, Blast_Score=180, Evalue=7e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018013 [H]

Pfam domain/function: PF03502 Channel_Tsx [H]

EC number: NA

Molecular weight: Translated: 29741; Mature: 29741

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVKMMAVAAATFAALSTGAAQAEQFYGFSNMSVNYLDWTAKAEERSNGGYGGAKEDFV
CCCEEEEEEHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEE
YLEIEGGAGYSWGDVYGFVDLENPENINKSERDFSGNPVTDSFRIAAKGSIAANIGSSNW
EEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCC
NVYSHLYSLTVAGEGFFDQNLVVGVSYDVFTDSGFWIKPFLGVHYENQTFAGSGFNGYMA
EEEEEEEEEEEECCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEECCCEEECCCCCCEEE
GWVLGYNFELGGQKFMVTNWHETEFAREDQFRGNGTQYTLKSTGQNGAVSLWWNATQELT
EEEEEEEEEECCCEEEEECCCCHHHCCCCCCCCCCEEEEEEECCCCCCEEEEECCCEEEE
FGLQYRYADHKLGTAAYHDAAIFTAKYNF
EEEEEEECCCCCCCCEECCEEEEEEEECC
>Mature Secondary Structure
MKNVKMMAVAAATFAALSTGAAQAEQFYGFSNMSVNYLDWTAKAEERSNGGYGGAKEDFV
CCCEEEEEEHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEE
YLEIEGGAGYSWGDVYGFVDLENPENINKSERDFSGNPVTDSFRIAAKGSIAANIGSSNW
EEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCC
NVYSHLYSLTVAGEGFFDQNLVVGVSYDVFTDSGFWIKPFLGVHYENQTFAGSGFNGYMA
EEEEEEEEEEEECCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEECCCEEECCCCCCEEE
GWVLGYNFELGGQKFMVTNWHETEFAREDQFRGNGTQYTLKSTGQNGAVSLWWNATQELT
EEEEEEEEEECCCEEEEECCCCHHHCCCCCCCCCCEEEEEEECCCCCCEEEEECCCEEEE
FGLQYRYADHKLGTAAYHDAAIFTAKYNF
EEEEEEECCCCCCCCEECCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7559336; 9205837; 9278503 [H]