The gene/protein map for NC_002942 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yeiJ [C]

Identifier: 119774108

GI number: 119774108

Start: 1174043

End: 1175302

Strand: Direct

Name: yeiJ [C]

Synonym: Sama_0971

Alternate gene names: 119774108

Gene position: 1174043-1175302 (Clockwise)

Preceding gene: 119774107

Following gene: 119774109

Centisome position: 27.26

GC content: 52.14

Gene sequence:

>1260_bases
ATGAGTATATTAATGAGCTTGGTAGGCGTTGCAGTCCTACTTGGAATAGGTTTCCTCCTTTCCAATAACAAAAAGGCGAT
CAGTGTACGTGCCGTTGGTGGTGCGCTGGCTATTCAGGCTGCCTTCGGTGGCTTCGTTCTGTATGTACCTTGGGGTAAAG
ACATCCTGAAGACTGTGTCTGACGGTGTATCTGCCGTTATCGGTTACGGTCAGAACGGTATCAACTTCCTGTTCGGTGAT
CTGGCTCAGTTCAAAGTTGGCTTCATTTTCGCCATCAACGTGCTGCCAGTTATCATTTTCTTCTCTTCTTTGATTGCTGT
GCTTTACTACCTGGGCATCATGCAGTGGGTCATCCGTATCATCGGTGGTGGTCTGCAAAAAGCTCTCGGTACAAGCCGTA
CAGAGTCCATGTCTGCTACTGCGAACATCTTCGTAGGTCAGACAGAAGCGCCTCTGGTAGTACGTCCATTCATCCCAACC
ATGACTCAGTCTGAACTGTTCGCCATCATGGTGGGCGGTCTGGCTTCTATCGCGGGTTCTGTACTGGCCGGTTACGCCTC
TATGGGCGTTAAGATTGAGTACCTGGTAGCTGCATCATTCATGGCTGCTCCTGGTGGTCTGTTGATGGCCAAGCTGATGC
ACCCTGAAACTGAAAATACCAAGAACGAAATGGATGAGCTGCCAGAAGATCCTGACAAGCCAGCCAACGTTCTGGACGCT
GCCGCAGCTGGTGCCTCTTCCGGTATGCACCTGGCTCTGAACGTAGGCGCGATGCTGATTGCCTTCGTGGGTCTGATTGC
CATGATCAACGGTATCATCGGTGGCGTAGGTGGCTGGTTCGGTGTTGAAGGTCTGACCCTCGAGCTGATCCTTGGTTACA
TCTTCATGCCACTGGCATTCCTTATCGGTGTTCCATGGAACGAAGCGTTGGTTGCCGGTTCTTTCATCGGTCAGAAGATC
GTTGTGAACGAGTTCGTTGCTTACCTGAACTTCGCTCCTTACCTGAAAGACATCGCTGACGGCGGTATCGTGGTAGCTGA
GACTGGTGCTGCTATGTCTGACCGTACCAAGGCTATCGTGTCCTTCGCTCTGTGTGGATTCGCTAACCTGTCTTCTATCG
CTATTCTGCTGGGTGGTCTGGGAGCGATGGCGCCTAACCGTCGCCACGATCTGGCCAAGCTGGGTATCCGTGCCGTTATC
GCCGGTTCTCTGGCTAACCTGATGAGTGCGACTCTGGCAGGTCTGTTCCTGGCGATTTAA

Upstream 100 bases:

>100_bases
TCAAAACGACGATTTTCAGCAAGGGCTAAGGTATAATCTTGCTCGGAAATAGGTTGGTTAACAACATAACTAAAAAGTGT
TAACAAAAGGGTGATGGTTA

Downstream 100 bases:

>100_bases
TCGCGCAGAGGGGCCCTGATATCGGGGCCCCTGTTAATACAACCATTTTCCAACGAATCGTCTGAAACTTATCCATCACT
GTGATACAGAGCGATGGGGC

Product: nucleoside transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MSILMSLVGVAVLLGIGFLLSNNKKAISVRAVGGALAIQAAFGGFVLYVPWGKDILKTVSDGVSAVIGYGQNGINFLFGD
LAQFKVGFIFAINVLPVIIFFSSLIAVLYYLGIMQWVIRIIGGGLQKALGTSRTESMSATANIFVGQTEAPLVVRPFIPT
MTQSELFAIMVGGLASIAGSVLAGYASMGVKIEYLVAASFMAAPGGLLMAKLMHPETENTKNEMDELPEDPDKPANVLDA
AAAGASSGMHLALNVGAMLIAFVGLIAMINGIIGGVGGWFGVEGLTLELILGYIFMPLAFLIGVPWNEALVAGSFIGQKI
VVNEFVAYLNFAPYLKDIADGGIVVAETGAAMSDRTKAIVSFALCGFANLSSIAILLGGLGAMAPNRRHDLAKLGIRAVI
AGSLANLMSATLAGLFLAI

Sequences:

>Translated_419_residues
MSILMSLVGVAVLLGIGFLLSNNKKAISVRAVGGALAIQAAFGGFVLYVPWGKDILKTVSDGVSAVIGYGQNGINFLFGD
LAQFKVGFIFAINVLPVIIFFSSLIAVLYYLGIMQWVIRIIGGGLQKALGTSRTESMSATANIFVGQTEAPLVVRPFIPT
MTQSELFAIMVGGLASIAGSVLAGYASMGVKIEYLVAASFMAAPGGLLMAKLMHPETENTKNEMDELPEDPDKPANVLDA
AAAGASSGMHLALNVGAMLIAFVGLIAMINGIIGGVGGWFGVEGLTLELILGYIFMPLAFLIGVPWNEALVAGSFIGQKI
VVNEFVAYLNFAPYLKDIADGGIVVAETGAAMSDRTKAIVSFALCGFANLSSIAILLGGLGAMAPNRRHDLAKLGIRAVI
AGSLANLMSATLAGLFLAI
>Mature_418_residues
SILMSLVGVAVLLGIGFLLSNNKKAISVRAVGGALAIQAAFGGFVLYVPWGKDILKTVSDGVSAVIGYGQNGINFLFGDL
AQFKVGFIFAINVLPVIIFFSSLIAVLYYLGIMQWVIRIIGGGLQKALGTSRTESMSATANIFVGQTEAPLVVRPFIPTM
TQSELFAIMVGGLASIAGSVLAGYASMGVKIEYLVAASFMAAPGGLLMAKLMHPETENTKNEMDELPEDPDKPANVLDAA
AAGASSGMHLALNVGAMLIAFVGLIAMINGIIGGVGGWFGVEGLTLELILGYIFMPLAFLIGVPWNEALVAGSFIGQKIV
VNEFVAYLNFAPYLKDIADGGIVVAETGAAMSDRTKAIVSFALCGFANLSSIAILLGGLGAMAPNRRHDLAKLGIRAVIA
GSLANLMSATLAGLFLAI

Specific function: Unknown

COG id: COG1972

COG function: function code F; Nucleoside permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]

Homologues:

Organism=Homo sapiens, GI42542381, Length=414, Percent_Identity=38.6473429951691, Blast_Score=298, Evalue=6e-81,
Organism=Homo sapiens, GI227116277, Length=414, Percent_Identity=39.1304347826087, Blast_Score=297, Evalue=1e-80,
Organism=Homo sapiens, GI11545853, Length=355, Percent_Identity=43.0985915492958, Blast_Score=293, Evalue=3e-79,
Organism=Escherichia coli, GI1788485, Length=424, Percent_Identity=48.5849056603774, Blast_Score=370, Evalue=1e-103,
Organism=Escherichia coli, GI1788488, Length=424, Percent_Identity=49.0566037735849, Blast_Score=356, Evalue=2e-99,
Organism=Escherichia coli, GI1788737, Length=415, Percent_Identity=28.6746987951807, Blast_Score=174, Evalue=8e-45,
Organism=Caenorhabditis elegans, GI17560276, Length=409, Percent_Identity=30.0733496332518, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI71991794, Length=412, Percent_Identity=30.5825242718447, Blast_Score=207, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI25146537, Length=199, Percent_Identity=32.6633165829146, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI45552519, Length=414, Percent_Identity=37.9227053140097, Blast_Score=286, Evalue=2e-77,
Organism=Drosophila melanogaster, GI45552517, Length=414, Percent_Identity=37.9227053140097, Blast_Score=286, Evalue=2e-77,
Organism=Drosophila melanogaster, GI19921868, Length=414, Percent_Identity=37.9227053140097, Blast_Score=286, Evalue=2e-77,
Organism=Drosophila melanogaster, GI281360430, Length=411, Percent_Identity=37.4695863746959, Blast_Score=270, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008276
- InterPro:   IPR018270
- InterPro:   IPR011642
- InterPro:   IPR011657
- InterPro:   IPR002668 [H]

Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]

EC number: NA

Molecular weight: Translated: 43458; Mature: 43327

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILMSLVGVAVLLGIGFLLSNNKKAISVRAVGGALAIQAAFGGFVLYVPWGKDILKTVS
CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHEECCCEEEEECCCHHHHHHHH
DGVSAVIGYGQNGINFLFGDLAQFKVGFIFAINVLPVIIFFSSLIAVLYYLGIMQWVIRI
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGGGLQKALGTSRTESMSATANIFVGQTEAPLVVRPFIPTMTQSELFAIMVGGLASIAGS
HCCHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
VLAGYASMGVKIEYLVAASFMAAPGGLLMAKLMHPETENTKNEMDELPEDPDKPANVLDA
HHHHHHHHCCEEEHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHH
AAAGASSGMHLALNVGAMLIAFVGLIAMINGIIGGVGGWFGVEGLTLELILGYIFMPLAF
HHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHH
LIGVPWNEALVAGSFIGQKIVVNEFVAYLNFAPYLKDIADGGIVVAETGAAMSDRTKAIV
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
SFALCGFANLSSIAILLGGLGAMAPNRRHDLAKLGIRAVIAGSLANLMSATLAGLFLAI
HHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SILMSLVGVAVLLGIGFLLSNNKKAISVRAVGGALAIQAAFGGFVLYVPWGKDILKTVS
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHEECCCEEEEECCCHHHHHHHH
DGVSAVIGYGQNGINFLFGDLAQFKVGFIFAINVLPVIIFFSSLIAVLYYLGIMQWVIRI
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGGGLQKALGTSRTESMSATANIFVGQTEAPLVVRPFIPTMTQSELFAIMVGGLASIAGS
HCCHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
VLAGYASMGVKIEYLVAASFMAAPGGLLMAKLMHPETENTKNEMDELPEDPDKPANVLDA
HHHHHHHHCCEEEHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHH
AAAGASSGMHLALNVGAMLIAFVGLIAMINGIIGGVGGWFGVEGLTLELILGYIFMPLAF
HHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHH
LIGVPWNEALVAGSFIGQKIVVNEFVAYLNFAPYLKDIADGGIVVAETGAAMSDRTKAIV
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
SFALCGFANLSSIAILLGGLGAMAPNRRHDLAKLGIRAVIAGSLANLMSATLAGLFLAI
HHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]