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The map label for this gene is nhaR [H]

Identifier: 119774007

GI number: 119774007

Start: 1060712

End: 1061620

Strand: Direct

Name: nhaR [H]

Synonym: Sama_0870

Alternate gene names: 119774007

Gene position: 1060712-1061620 (Clockwise)

Preceding gene: 119774006

Following gene: 119774008

Centisome position: 24.63

GC content: 52.26

Gene sequence:

>909_bases
ATGCAGCATCTGAATTACAACCATCTTTATTATTTCTGGATGGTACAGAGCAAGGGCTCGGTGGTAAAAGCTGCCGAGGC
CCTGTGCCTCACACCACAAACCGTTACCGGGCAGATCCGTGCGCTGGAAGACAGGCTCGGTGGTGCGCTGTTCAAACGGG
TTGGGCGACAACTTGAACCCACGGACTTGGGGGAGCTGGTTTTTCGATACGCCGACAAGATGTTCAACTTAAGCTATGAG
CTTTTGGACATATTGAACTACCGCAAAGACGCTGCCATGTTGTTTGAGGTGGGCATTGCAGATGCTCTGTCCAAGGCGCT
GTCGAGCCGGGTACTCCTGTCTGTGTTGCCTACAGACGGTAGTATGCGTCTGGCCTGTTATGAAGCTACCCACGAGAGCC
TGATGGCACGATTGCGGGAGCATAAATTGGACATGATCCTGTCTGATTGTGCCGGTGAGTCCCTCAAATATCCGGAAATC
CTGTCCAAAAAGTTGGGAGAGTGCGGCGTCAGTTTCTTCTCTTCTAAAACCTACACCAAGCCTTTCCCCGCCTGCCTTGA
GGAAGACAAGCTGCTCATCCCGGGAAAGCGCACCAGCCTTGGGCAGCAGCTGCATCGCTGGTTTGCTGAAAAGAACCTCG
AAGTGCGTATTCTCGGGGAATTCGACGATGCGGCCATGATGAAAGCCTTCGGCTTTTTCGGACAAGGGATTTTTGTCGCC
CCGTCGATTTACAAGCAGGATATTTTAGGCCACGGCATGCAAGTGATAGGCGAAACTCGGGACGTTCGGGAGGAATATCA
TGTGATGTTCGCCGAGCGCATGATCCAGCATCCAGCGGTTCAACGATTGCTTGAGACACGTTTTGATGACCTGTTTTCAG
GGCTCGACAGTCAGGTTCAGAGCTTTTAA

Upstream 100 bases:

>100_bases
TGGAAGGGCTGACCGAAGCTGTGAGCTCTGGCGAAGTGAAGGATCAGGAAGGCCTGGCCCAGGCCATGTACAGCCTGCTC
GATTGTCAGCGTCTTAAGTA

Downstream 100 bases:

>100_bases
TTGCGTGTCAGCTATCTTCCGAGGTCCCAAGGTGCCCCCTTGCCAATTTCCTGCTAAACTTGGCGCCAAATTTTCAGAGG
CTTAAGGAAGCAATAAGTGA

Product: transcriptional activator NhaR

Products: NA

Alternate protein names: Na(+)/H(+) antiporter regulatory protein [H]

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MQHLNYNHLYYFWMVQSKGSVVKAAEALCLTPQTVTGQIRALEDRLGGALFKRVGRQLEPTDLGELVFRYADKMFNLSYE
LLDILNYRKDAAMLFEVGIADALSKALSSRVLLSVLPTDGSMRLACYEATHESLMARLREHKLDMILSDCAGESLKYPEI
LSKKLGECGVSFFSSKTYTKPFPACLEEDKLLIPGKRTSLGQQLHRWFAEKNLEVRILGEFDDAAMMKAFGFFGQGIFVA
PSIYKQDILGHGMQVIGETRDVREEYHVMFAERMIQHPAVQRLLETRFDDLFSGLDSQVQSF

Sequences:

>Translated_302_residues
MQHLNYNHLYYFWMVQSKGSVVKAAEALCLTPQTVTGQIRALEDRLGGALFKRVGRQLEPTDLGELVFRYADKMFNLSYE
LLDILNYRKDAAMLFEVGIADALSKALSSRVLLSVLPTDGSMRLACYEATHESLMARLREHKLDMILSDCAGESLKYPEI
LSKKLGECGVSFFSSKTYTKPFPACLEEDKLLIPGKRTSLGQQLHRWFAEKNLEVRILGEFDDAAMMKAFGFFGQGIFVA
PSIYKQDILGHGMQVIGETRDVREEYHVMFAERMIQHPAVQRLLETRFDDLFSGLDSQVQSF
>Mature_302_residues
MQHLNYNHLYYFWMVQSKGSVVKAAEALCLTPQTVTGQIRALEDRLGGALFKRVGRQLEPTDLGELVFRYADKMFNLSYE
LLDILNYRKDAAMLFEVGIADALSKALSSRVLLSVLPTDGSMRLACYEATHESLMARLREHKLDMILSDCAGESLKYPEI
LSKKLGECGVSFFSSKTYTKPFPACLEEDKLLIPGKRTSLGQQLHRWFAEKNLEVRILGEFDDAAMMKAFGFFGQGIFVA
PSIYKQDILGHGMQVIGETRDVREEYHVMFAERMIQHPAVQRLLETRFDDLFSGLDSQVQSF

Specific function: Plays a role in the positive regulation of nhaA [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786202, Length=295, Percent_Identity=59.6610169491525, Blast_Score=359, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34304; Mature: 34304

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHLNYNHLYYFWMVQSKGSVVKAAEALCLTPQTVTGQIRALEDRLGGALFKRVGRQLEP
CCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
TDLGELVFRYADKMFNLSYELLDILNYRKDAAMLFEVGIADALSKALSSRVLLSVLPTDG
CHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC
SMRLACYEATHESLMARLREHKLDMILSDCAGESLKYPEILSKKLGECGVSFFSSKTYTK
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PFPACLEEDKLLIPGKRTSLGQQLHRWFAEKNLEVRILGEFDDAAMMKAFGFFGQGIFVA
CCHHHHCCCCEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCEEC
PSIYKQDILGHGMQVIGETRDVREEYHVMFAERMIQHPAVQRLLETRFDDLFSGLDSQVQ
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
SF
CC
>Mature Secondary Structure
MQHLNYNHLYYFWMVQSKGSVVKAAEALCLTPQTVTGQIRALEDRLGGALFKRVGRQLEP
CCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
TDLGELVFRYADKMFNLSYELLDILNYRKDAAMLFEVGIADALSKALSSRVLLSVLPTDG
CHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC
SMRLACYEATHESLMARLREHKLDMILSDCAGESLKYPEILSKKLGECGVSFFSSKTYTK
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PFPACLEEDKLLIPGKRTSLGQQLHRWFAEKNLEVRILGEFDDAAMMKAFGFFGQGIFVA
CCHHHHCCCCEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCEEC
PSIYKQDILGHGMQVIGETRDVREEYHVMFAERMIQHPAVQRLLETRFDDLFSGLDSQVQ
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
SF
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2429258; 1630901; 9278503; 3413113; 1316901; 8168494 [H]