Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is exeA [H]

Identifier: 119773972

GI number: 119773972

Start: 1018134

End: 1019975

Strand: Direct

Name: exeA [H]

Synonym: Sama_0835

Alternate gene names: 119773972

Gene position: 1018134-1019975 (Clockwise)

Preceding gene: 119773969

Following gene: 119773973

Centisome position: 23.64

GC content: 55.86

Gene sequence:

>1842_bases
ATGTACAAGGCGTTTTATGGGTTAAAGGACAACCCATTTTCCATTGCACCCAATCCAACGTATCTGTTCCTCAGTGACAG
GCACCGAGAGGCACTTGCACACCTGACCTATGGGCTTGGTGAAACCGGCGGTTTTGTGCTGCTCACCGGCGAAGTTGGCA
CCGGCAAAACCACGGTCTCCCGCTGCTTATTGCGTCAATTGCCCGATACAACTGATACCGCATTTATCCTGAACCCGGCC
CTGACCGAACTTGAGCTGCTGGCAACCCTTTGTGATGAACTCAAGATCCCCTATGGTGAATCCCCCAGTCTTAAGCGGCT
GACTGACCTCATCAGTGGCTTTTTACTTAAGAACCACAACGCCGGTCGTAATACAGTACTGATTATTGATGAAGCACAGC
ACCTCAAAGCGGAGGTGCTCGAGCAGCTCAGGCTGCTGACCAACCTCGAAACCGATACCAAAAAGCTGCTGCAGGTGATC
TTGATTGGCCAACCTGAGCTGCAACAACTCCTCAAGCGTCAGGAGCTCAGACAGCTCGCTCAGCGCATTACAGCCCGTTA
TCATCTATTACCCCTTACCGCAGAAGAAGTCGGCCTGTACGTGCAGCACAGGCTGCAGGTGGCTGGGAGGTTTGAACCCC
TGTTCAACGCAGGTGCCATAAAGGCGTTGCACAAGGCCAGTGGCGGTATTCCCCGGATCATTAATCTGCTGTGCGAGAGG
GCTCTAATGGCGGGCTTTGCCCAGAGTCGGGTGCCCATCAATAAGCAGATGGTGCGTCAGGCTGCAGTTGAAGTTCTGGG
GCTCGAACCCCAAAGACCATCCTGGTACGAGCGCCCACTTCCTATGACGCTGGCCACGGCCCTGACATTTGGCGTGGCGC
TGTATGGCTTTAATTACCTTAATCAGCCCGTGACGGCGGCCACATCGCTCGCGTTGCCCATTGCGGACTCACCTGTGCAG
GGGGCCCCTGTGCAGGCAGCGCCTGAGTCGCTGCAGCCTGAGTTGCAGCCGACTGCAACAGTTAATCAAAGCACGATCGA
GCCCTTGCAACCGGATTCGTCTGGGGTAACCTCAGGCGCACAATCTGAAACGGCGATGGAGAATTTGGCAGATATTGCCA
CGGATAGCACGCTACAAAACCAGGTCTTGGCACAGAGCTCGCCCATCAGCCGCATCACGGATGCCGGGGCAGAGCTTGCC
GAGCTTGAAGCCCGTCAGGCAAAAGTGCGCGAACGGGTGCTGACGGACGCTGTGGCACAAAGCCGCAGTTTGGATACGGC
CTATGCTGCTCTCTTCGGCGCCTGGGGCCTGGCGCCGATAAAAGATCTCAGTCCCTGTGAGTCGGCCCGTGAGCAAGGGC
TGTCCTGTTTTCAGCAACAGGGGACCTGGTTTAATTTGGTTAAGCTTAACTATCCGGCGGTGGCCTACATGATGGATGAC
GCCGGTGGCGAGTTCTTCGTCACCGTGATTGAGCGGGATGGAGACGAGCTGCTGGTGCAGCTTGCCGAGCAGCAGCTTTG
GGTTAACCGGGACTGGTTCAATCGCCACTTCACCGGCACCTTTGAACTCTTTTGGCAGGCGCCTGTCTACAGCCCTCGGG
AAATCGGGATTGCGTCACCACAGCCAGAGGTGCAATGGCTGGAAAATGGTTTGGCCAAGGTCGACAAAATCACCCCAAGA
TTGGTCAATGAATTTGATACGGAGCTTGAAAATCGCCTCAAGTTGTTCCAGCGTCAGCATGGCCTCAAGGCCGATGGTAT
CGCCGGCAGTCAAACTCTGCAGCAACTCAACCTGTACCTGAGCAATGAAGGTCCACGCCTGGTGCAGGGAGGGCTGTACT
GA

Upstream 100 bases:

>100_bases
TTGACATTGACCGCCACTGGCATTACCTTGGCTCCACTCGCTGTATTCAGGTAGCCAGGGCTGCTGGCACTGGGCGGTTT
CCAAGAAGGATAGATAAGGC

Downstream 100 bases:

>100_bases
TGTCTATCCTGCTTGACGCAGTAACGCGAAGTAAACAACAGGAGAACGGCTTCGACCCTGTCTCCAGTCCGCGCCCACAG
TATCGACCCGAAAAGGCGCC

Product: peptidoglycan binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 613; Mature: 613

Protein sequence:

>613_residues
MYKAFYGLKDNPFSIAPNPTYLFLSDRHREALAHLTYGLGETGGFVLLTGEVGTGKTTVSRCLLRQLPDTTDTAFILNPA
LTELELLATLCDELKIPYGESPSLKRLTDLISGFLLKNHNAGRNTVLIIDEAQHLKAEVLEQLRLLTNLETDTKKLLQVI
LIGQPELQQLLKRQELRQLAQRITARYHLLPLTAEEVGLYVQHRLQVAGRFEPLFNAGAIKALHKASGGIPRIINLLCER
ALMAGFAQSRVPINKQMVRQAAVEVLGLEPQRPSWYERPLPMTLATALTFGVALYGFNYLNQPVTAATSLALPIADSPVQ
GAPVQAAPESLQPELQPTATVNQSTIEPLQPDSSGVTSGAQSETAMENLADIATDSTLQNQVLAQSSPISRITDAGAELA
ELEARQAKVRERVLTDAVAQSRSLDTAYAALFGAWGLAPIKDLSPCESAREQGLSCFQQQGTWFNLVKLNYPAVAYMMDD
AGGEFFVTVIERDGDELLVQLAEQQLWVNRDWFNRHFTGTFELFWQAPVYSPREIGIASPQPEVQWLENGLAKVDKITPR
LVNEFDTELENRLKLFQRQHGLKADGIAGSQTLQQLNLYLSNEGPRLVQGGLY

Sequences:

>Translated_613_residues
MYKAFYGLKDNPFSIAPNPTYLFLSDRHREALAHLTYGLGETGGFVLLTGEVGTGKTTVSRCLLRQLPDTTDTAFILNPA
LTELELLATLCDELKIPYGESPSLKRLTDLISGFLLKNHNAGRNTVLIIDEAQHLKAEVLEQLRLLTNLETDTKKLLQVI
LIGQPELQQLLKRQELRQLAQRITARYHLLPLTAEEVGLYVQHRLQVAGRFEPLFNAGAIKALHKASGGIPRIINLLCER
ALMAGFAQSRVPINKQMVRQAAVEVLGLEPQRPSWYERPLPMTLATALTFGVALYGFNYLNQPVTAATSLALPIADSPVQ
GAPVQAAPESLQPELQPTATVNQSTIEPLQPDSSGVTSGAQSETAMENLADIATDSTLQNQVLAQSSPISRITDAGAELA
ELEARQAKVRERVLTDAVAQSRSLDTAYAALFGAWGLAPIKDLSPCESAREQGLSCFQQQGTWFNLVKLNYPAVAYMMDD
AGGEFFVTVIERDGDELLVQLAEQQLWVNRDWFNRHFTGTFELFWQAPVYSPREIGIASPQPEVQWLENGLAKVDKITPR
LVNEFDTELENRLKLFQRQHGLKADGIAGSQTLQQLNLYLSNEGPRLVQGGLY
>Mature_613_residues
MYKAFYGLKDNPFSIAPNPTYLFLSDRHREALAHLTYGLGETGGFVLLTGEVGTGKTTVSRCLLRQLPDTTDTAFILNPA
LTELELLATLCDELKIPYGESPSLKRLTDLISGFLLKNHNAGRNTVLIIDEAQHLKAEVLEQLRLLTNLETDTKKLLQVI
LIGQPELQQLLKRQELRQLAQRITARYHLLPLTAEEVGLYVQHRLQVAGRFEPLFNAGAIKALHKASGGIPRIINLLCER
ALMAGFAQSRVPINKQMVRQAAVEVLGLEPQRPSWYERPLPMTLATALTFGVALYGFNYLNQPVTAATSLALPIADSPVQ
GAPVQAAPESLQPELQPTATVNQSTIEPLQPDSSGVTSGAQSETAMENLADIATDSTLQNQVLAQSSPISRITDAGAELA
ELEARQAKVRERVLTDAVAQSRSLDTAYAALFGAWGLAPIKDLSPCESAREQGLSCFQQQGTWFNLVKLNYPAVAYMMDD
AGGEFFVTVIERDGDELLVQLAEQQLWVNRDWFNRHFTGTFELFWQAPVYSPREIGIASPQPEVQWLENGLAKVDKITPR
LVNEFDTELENRLKLFQRQHGLKADGIAGSQTLQQLNLYLSNEGPRLVQGGLY

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG3267

COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)

Gene ontology:

Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exeA family [H]

Homologues:

Organism=Escherichia coli, GI1789720, Length=171, Percent_Identity=30.4093567251462, Blast_Score=79, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003959
- InterPro:   IPR002477 [H]

Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]

EC number: NA

Molecular weight: Translated: 67704; Mature: 67704

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKAFYGLKDNPFSIAPNPTYLFLSDRHREALAHLTYGLGETGGFVLLTGEVGTGKTTVS
CCCCEECCCCCCCEECCCCEEEEEECHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHH
RCLLRQLPDTTDTAFILNPALTELELLATLCDELKIPYGESPSLKRLTDLISGFLLKNHN
HHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC
AGRNTVLIIDEAQHLKAEVLEQLRLLTNLETDTKKLLQVILIGQPELQQLLKRQELRQLA
CCCCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QRITARYHLLPLTAEEVGLYVQHRLQVAGRFEPLFNAGAIKALHKASGGIPRIINLLCER
HHHHHHHEEEECCHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHH
ALMAGFAQSRVPINKQMVRQAAVEVLGLEPQRPSWYERPLPMTLATALTFGVALYGFNYL
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
NQPVTAATSLALPIADSPVQGAPVQAAPESLQPELQPTATVNQSTIEPLQPDSSGVTSGA
CCCHHHHHHEEECCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QSETAMENLADIATDSTLQNQVLAQSSPISRITDAGAELAELEARQAKVRERVLTDAVAQ
CHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SRSLDTAYAALFGAWGLAPIKDLSPCESAREQGLSCFQQQGTWFNLVKLNYPAVAYMMDD
HCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEC
AGGEFFVTVIERDGDELLVQLAEQQLWVNRDWFNRHFTGTFELFWQAPVYSPREIGIASP
CCCCEEEEEEECCCHHHHHHHHHHHHHCCCHHHCCCCCEEEEEEEECCCCCCHHCCCCCC
QPEVQWLENGLAKVDKITPRLVNEFDTELENRLKLFQRQHGLKADGIAGSQTLQQLNLYL
CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
SNEGPRLVQGGLY
CCCCCCCCCCCCC
>Mature Secondary Structure
MYKAFYGLKDNPFSIAPNPTYLFLSDRHREALAHLTYGLGETGGFVLLTGEVGTGKTTVS
CCCCEECCCCCCCEECCCCEEEEEECHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHH
RCLLRQLPDTTDTAFILNPALTELELLATLCDELKIPYGESPSLKRLTDLISGFLLKNHN
HHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC
AGRNTVLIIDEAQHLKAEVLEQLRLLTNLETDTKKLLQVILIGQPELQQLLKRQELRQLA
CCCCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QRITARYHLLPLTAEEVGLYVQHRLQVAGRFEPLFNAGAIKALHKASGGIPRIINLLCER
HHHHHHHEEEECCHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHH
ALMAGFAQSRVPINKQMVRQAAVEVLGLEPQRPSWYERPLPMTLATALTFGVALYGFNYL
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
NQPVTAATSLALPIADSPVQGAPVQAAPESLQPELQPTATVNQSTIEPLQPDSSGVTSGA
CCCHHHHHHEEECCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QSETAMENLADIATDSTLQNQVLAQSSPISRITDAGAELAELEARQAKVRERVLTDAVAQ
CHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SRSLDTAYAALFGAWGLAPIKDLSPCESAREQGLSCFQQQGTWFNLVKLNYPAVAYMMDD
HCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEC
AGGEFFVTVIERDGDELLVQLAEQQLWVNRDWFNRHFTGTFELFWQAPVYSPREIGIASP
CCCCEEEEEEECCCHHHHHHHHHHHHHCCCHHHCCCCCEEEEEEEECCCCCCHHCCCCCC
QPEVQWLENGLAKVDKITPRLVNEFDTELENRLKLFQRQHGLKADGIAGSQTLQQLNLYL
CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
SNEGPRLVQGGLY
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7961440 [H]