Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773951

Identifier: 119773951

GI number: 119773951

Start: 998630

End: 999892

Strand: Direct

Name: 119773951

Synonym: Sama_0814

Alternate gene names: NA

Gene position: 998630-999892 (Clockwise)

Preceding gene: 119773950

Following gene: 119773952

Centisome position: 23.19

GC content: 54.39

Gene sequence:

>1263_bases
ATGAAAAAAATCGCCGTTATCGGCTCGGGAATTTCCGGCCTCACCACTGCCCATTTACTCTCAGGTCAGCACGAGGTGAG
TCTGTTTGAGGCCAATGACTATCTCGGCGGACACACGGCCACCGTGGACGTGACGGTCGATGGCAAAGACTATGCGATAG
ATACAGGATTTATCGTATTCAACGACCGTACCTATCCCAATTTTCAGAAACTGCTGTCGCGGCTGTCGGTGACCAGTATT
CCCACTGAAATGAGCTTTTCGGTGCACAACCTCGACAGCGGTCTGGAGTACAACGGCCACACTCTGGCGACCCTGTTTGC
CCAAAAGCGCAACCTCTTCAGTCCCAAGTTTTGGGGGTTCCTTAACGAAATCATTAGGTTTAATAAGCTTGGCAAGGCCT
GTATTGAGTCCGGACATTACCCCTGCAACACCTTGGGTGAATTATTGGCCAAAGAGCAATTTTCAGACTTTTTTGCACGG
CATTACATATTGCCCATGGGGGCGGCCATCTGGTCTTCGAGCCTGGATGATATGGCGGCCTTTGAGCTTAAGTTTTTCCT
GCGCTTTTTCCACAATCATGGCCTGCTGAATGTCAGCGACCGCCCACAGTGGTACGTGCTCAAAGGTGGCTCACGCAGCT
ACATTCCGGCGCTGGTGGCACCTTTTGCAGAGCGTATTCATCTTTCGACTCCGGTTAGTGCGGTGAAGCGACATGGCCAG
GGGGTGTCTATTCAGACAAATGGTCAGGATTGGCATGAATTTGATGAACTGGTACTGGCCTGTCACAGCGATCAGGCCCT
GAAGCTGCTCACCGATGCCTCAGATGCTGAGCGGGACGTTCTTGGCGCCTTGCCTTATCGGCGCAATGACGTGGTGCTGC
ACACAGACACAGCGCTGCTGCCAAAACGCAAAGCCGCGTGGGCCAGCTGGAACTACCGTCTGGACGAAGACAACCAGCGT
CCGGCTGCGGTGACTTACCATATGAACACATTGCAGCGGCTGCCAGCGGGCTCTCCCGACTTTATGGTGACCCTCAATCA
GACCGATGCCATCGCCAAAGACAAAATTCTACGTCAGTTCAGTTATGCCCACCCGGTGTTTTCCTCGGCGGCCATGGCGG
CACAGGCCCGCAGGATGGAGATTTGCGGCCAGCAGCACACTCACTTTGCTGGCGCCTACTGGTACAACGGCTTCCATGAA
GACGGCGTCAGAAGCGCCCTGGATGTGTGCCAGCGCTTTGGTGTCAGTCTGGAGAGCGCATGA

Upstream 100 bases:

>100_bases
CCGAAGCAATGTCAGTCGCCAGTCGGCCTGATATGAAGCTGGCTGAATGATTCAACCTGTGTCCATTTGAGCTTTTTACA
TATCACCATTGGAAGATGAG

Downstream 100 bases:

>100_bases
ACAGCGGCATCTTTTTTGGTCATGTGAGTCATCAGCGGCTGGGGGCGGTGCGCCACAGCTTCAGTTACCCCATGGCCATG
CTGGTGATGGATCTGGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Dehydrogenase; Amine Oxidoreductase; Flavin Containing Amine Oxidoreductase; Flavin-Containing Amine Oxidase; Amino-Oxidase; Oxidoreductase; Amine Oxidase Flavin-Containing Superfamily; Amine Oxidase Flavin-Containing Protein; Amine Oxidase Protein; FAD-Dependent Oxidoreductase; Amine OxidaseFAD Dependent Oxidoreductase; Amino Oxidase; Amine-Oxidase; Fad Dependent Oxidoreductase; Flavin Containing Amine Oxidoreductase Protein; Flavin Containing Amine Oxidoreductas; Lipoprotein

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MKKIAVIGSGISGLTTAHLLSGQHEVSLFEANDYLGGHTATVDVTVDGKDYAIDTGFIVFNDRTYPNFQKLLSRLSVTSI
PTEMSFSVHNLDSGLEYNGHTLATLFAQKRNLFSPKFWGFLNEIIRFNKLGKACIESGHYPCNTLGELLAKEQFSDFFAR
HYILPMGAAIWSSSLDDMAAFELKFFLRFFHNHGLLNVSDRPQWYVLKGGSRSYIPALVAPFAERIHLSTPVSAVKRHGQ
GVSIQTNGQDWHEFDELVLACHSDQALKLLTDASDAERDVLGALPYRRNDVVLHTDTALLPKRKAAWASWNYRLDEDNQR
PAAVTYHMNTLQRLPAGSPDFMVTLNQTDAIAKDKILRQFSYAHPVFSSAAMAAQARRMEICGQQHTHFAGAYWYNGFHE
DGVRSALDVCQRFGVSLESA

Sequences:

>Translated_420_residues
MKKIAVIGSGISGLTTAHLLSGQHEVSLFEANDYLGGHTATVDVTVDGKDYAIDTGFIVFNDRTYPNFQKLLSRLSVTSI
PTEMSFSVHNLDSGLEYNGHTLATLFAQKRNLFSPKFWGFLNEIIRFNKLGKACIESGHYPCNTLGELLAKEQFSDFFAR
HYILPMGAAIWSSSLDDMAAFELKFFLRFFHNHGLLNVSDRPQWYVLKGGSRSYIPALVAPFAERIHLSTPVSAVKRHGQ
GVSIQTNGQDWHEFDELVLACHSDQALKLLTDASDAERDVLGALPYRRNDVVLHTDTALLPKRKAAWASWNYRLDEDNQR
PAAVTYHMNTLQRLPAGSPDFMVTLNQTDAIAKDKILRQFSYAHPVFSSAAMAAQARRMEICGQQHTHFAGAYWYNGFHE
DGVRSALDVCQRFGVSLESA
>Mature_420_residues
MKKIAVIGSGISGLTTAHLLSGQHEVSLFEANDYLGGHTATVDVTVDGKDYAIDTGFIVFNDRTYPNFQKLLSRLSVTSI
PTEMSFSVHNLDSGLEYNGHTLATLFAQKRNLFSPKFWGFLNEIIRFNKLGKACIESGHYPCNTLGELLAKEQFSDFFAR
HYILPMGAAIWSSSLDDMAAFELKFFLRFFHNHGLLNVSDRPQWYVLKGGSRSYIPALVAPFAERIHLSTPVSAVKRHGQ
GVSIQTNGQDWHEFDELVLACHSDQALKLLTDASDAERDVLGALPYRRNDVVLHTDTALLPKRKAAWASWNYRLDEDNQR
PAAVTYHMNTLQRLPAGSPDFMVTLNQTDAIAKDKILRQFSYAHPVFSSAAMAAQARRMEICGQQHTHFAGAYWYNGFHE
DGVRSALDVCQRFGVSLESA

Specific function: Unknown

COG id: COG2907

COG function: function code R; Predicted NAD/FAD-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46971; Mature: 46971

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIAVIGSGISGLTTAHLLSGQHEVSLFEANDYLGGHTATVDVTVDGKDYAIDTGFIVF
CCEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEECCCCEEEECCEEEE
NDRTYPNFQKLLSRLSVTSIPTEMSFSVHNLDSGLEYNGHTLATLFAQKRNLFSPKFWGF
CCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHH
LNEIIRFNKLGKACIESGHYPCNTLGELLAKEQFSDFFARHYILPMGAAIWSSSLDDMAA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHH
FELKFFLRFFHNHGLLNVSDRPQWYVLKGGSRSYIPALVAPFAERIHLSTPVSAVKRHGQ
HHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHEECCCCHHHHHHCCC
GVSIQTNGQDWHEFDELVLACHSDQALKLLTDASDAERDVLGALPYRRNDVVLHTDTALL
CEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCCC
PKRKAAWASWNYRLDEDNQRPAAVTYHMNTLQRLPAGSPDFMVTLNQTDAIAKDKILRQF
CCCCCHHCCCCEEECCCCCCCEEEEEEHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHH
SYAHPVFSSAAMAAQARRMEICGQQHTHFAGAYWYNGFHEDGVRSALDVCQRFGVSLESA
HHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHEECCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKKIAVIGSGISGLTTAHLLSGQHEVSLFEANDYLGGHTATVDVTVDGKDYAIDTGFIVF
CCEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEECCCCEEEECCEEEE
NDRTYPNFQKLLSRLSVTSIPTEMSFSVHNLDSGLEYNGHTLATLFAQKRNLFSPKFWGF
CCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHH
LNEIIRFNKLGKACIESGHYPCNTLGELLAKEQFSDFFARHYILPMGAAIWSSSLDDMAA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHH
FELKFFLRFFHNHGLLNVSDRPQWYVLKGGSRSYIPALVAPFAERIHLSTPVSAVKRHGQ
HHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHEECCCCHHHHHHCCC
GVSIQTNGQDWHEFDELVLACHSDQALKLLTDASDAERDVLGALPYRRNDVVLHTDTALL
CEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCCC
PKRKAAWASWNYRLDEDNQRPAAVTYHMNTLQRLPAGSPDFMVTLNQTDAIAKDKILRQF
CCCCCHHCCCCEEECCCCCCCEEEEEEHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHH
SYAHPVFSSAAMAAQARRMEICGQQHTHFAGAYWYNGFHEDGVRSALDVCQRFGVSLESA
HHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHEECCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA