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The map label for this gene is ydfG [C]

Identifier: 119773950

GI number: 119773950

Start: 997799

End: 998560

Strand: Direct

Name: ydfG [C]

Synonym: Sama_0813

Alternate gene names: 119773950

Gene position: 997799-998560 (Clockwise)

Preceding gene: 119773949

Following gene: 119773951

Centisome position: 23.17

GC content: 58.79

Gene sequence:

>762_bases
ATGACCATGCTGAGCGGACGGGTACTTATCACAGGCGCCAGCTCTGGCATAGGGCAGGCGCTGGCACTGGAATACCTAAA
ATCAGGTTGGCAGGTGGTGGCCTGTGGCCGTGATAGAGCACGCCTCGATGCCTTATTGGACGCCCATCCGCGCTTTGCCT
GCCAACTCTCCACGCTAACGTTTAACGTGTGTGACAGGCTGGCCTGCCTCGAGGCTGCGTCGTCACTGGATGGTGAGCTT
GACCTTATCATCCTTAACGCAGGCAGCTGCGAGTACATAGATAATCCCAAGGCCTTCGATGGGAAGCTGTTCGCCCGGGT
CATTGAAACCAACCTGATTTCTGTGGGTTATTGCCTGGAGGCCTTCTTGCCTGCATTGGCTGCAGGTGGTCGGCTGGCGT
TGATGGGCTCCAGCGCAGCGCTCTTGCCGCTGCCCCGAGCCGAAGCGTACGGCGCCTCTAAGGCCGCATTGGCATATCTG
GCAAGTACCTTGCGATTGCATCTGGCGCCCGCAGACATTGGCGTATCCCTGATAGAACCGGGTTTTGTGCGCACCCCACT
GACGGACAAAAACGATTTCCCCATGCCGGGACGGATAGAAGTTGAAGATGCGGCGCGGCGTATTGTTGATGCTCTTGCCA
GGGAAAAAGACCGTATTCAATTCCCTCGCAGGCTGCTGTGGCCCATGCGGCTGCTTGCGCTGCTGCCGGGCGCCGTATGG
GGCCTGATAGCCCGAAGCAATGTCAGTCGCCAGTCGGCCTGA

Upstream 100 bases:

>100_bases
ATTTCCACAGAGACTACTTCGATGTGGGGGCCATGCTGTATGAGCATATTCCCGGCCTTGGCGCTCTGGTGCGGCTGGTG
AAAAACAGGGCGGGCAAGTA

Downstream 100 bases:

>100_bases
TATGAAGCTGGCTGAATGATTCAACCTGTGTCCATTTGAGCTTTTTACATATCACCATTGGAAGATGAGATGAAAAAAAT
CGCCGTTATCGGCTCGGGAA

Product: short chain dehydrogenase/reductase family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTMLSGRVLITGASSGIGQALALEYLKSGWQVVACGRDRARLDALLDAHPRFACQLSTLTFNVCDRLACLEAASSLDGEL
DLIILNAGSCEYIDNPKAFDGKLFARVIETNLISVGYCLEAFLPALAAGGRLALMGSSAALLPLPRAEAYGASKAALAYL
ASTLRLHLAPADIGVSLIEPGFVRTPLTDKNDFPMPGRIEVEDAARRIVDALAREKDRIQFPRRLLWPMRLLALLPGAVW
GLIARSNVSRQSA

Sequences:

>Translated_253_residues
MTMLSGRVLITGASSGIGQALALEYLKSGWQVVACGRDRARLDALLDAHPRFACQLSTLTFNVCDRLACLEAASSLDGEL
DLIILNAGSCEYIDNPKAFDGKLFARVIETNLISVGYCLEAFLPALAAGGRLALMGSSAALLPLPRAEAYGASKAALAYL
ASTLRLHLAPADIGVSLIEPGFVRTPLTDKNDFPMPGRIEVEDAARRIVDALAREKDRIQFPRRLLWPMRLLALLPGAVW
GLIARSNVSRQSA
>Mature_252_residues
TMLSGRVLITGASSGIGQALALEYLKSGWQVVACGRDRARLDALLDAHPRFACQLSTLTFNVCDRLACLEAASSLDGELD
LIILNAGSCEYIDNPKAFDGKLFARVIETNLISVGYCLEAFLPALAAGGRLALMGSSAALLPLPRAEAYGASKAALAYLA
STLRLHLAPADIGVSLIEPGFVRTPLTDKNDFPMPGRIEVEDAARRIVDALAREKDRIQFPRRLLWPMRLLALLPGAVWG
LIARSNVSRQSA

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=273, Percent_Identity=27.4725274725275, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI223718074, Length=192, Percent_Identity=33.8541666666667, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI32483357, Length=188, Percent_Identity=26.5957446808511, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI7657478, Length=189, Percent_Identity=30.1587301587302, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1787820, Length=181, Percent_Identity=29.8342541436464, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1786701, Length=263, Percent_Identity=30.4182509505703, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082100, Length=216, Percent_Identity=27.3148148148148, Blast_Score=65, Evalue=3e-12,
Organism=Drosophila melanogaster, GI23397609, Length=192, Percent_Identity=31.7708333333333, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI21358495, Length=193, Percent_Identity=29.5336787564767, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27162; Mature: 27031

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMLSGRVLITGASSGIGQALALEYLKSGWQVVACGRDRARLDALLDAHPRFACQLSTLT
CCEECCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCCEEEEHHHH
FNVCDRLACLEAASSLDGELDLIILNAGSCEYIDNPKAFDGKLFARVIETNLISVGYCLE
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AFLPALAAGGRLALMGSSAALLPLPRAEAYGASKAALAYLASTLRLHLAPADIGVSLIEP
HHHHHHHCCCEEEEECCCEEEEECCCHHHCCCHHHHHHHHHHHHHHEECCHHCCHHHCCC
GFVRTPLTDKNDFPMPGRIEVEDAARRIVDALAREKDRIQFPRRLLWPMRLLALLPGAVW
CCEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
GLIARSNVSRQSA
HHHHHCCCCCCCC
>Mature Secondary Structure 
TMLSGRVLITGASSGIGQALALEYLKSGWQVVACGRDRARLDALLDAHPRFACQLSTLT
CEECCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCCEEEEHHHH
FNVCDRLACLEAASSLDGELDLIILNAGSCEYIDNPKAFDGKLFARVIETNLISVGYCLE
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AFLPALAAGGRLALMGSSAALLPLPRAEAYGASKAALAYLASTLRLHLAPADIGVSLIEP
HHHHHHHCCCEEEEECCCEEEEECCCHHHCCCHHHHHHHHHHHHHHEECCHHCCHHHCCC
GFVRTPLTDKNDFPMPGRIEVEDAARRIVDALAREKDRIQFPRRLLWPMRLLALLPGAVW
CCEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
GLIARSNVSRQSA
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1730672 [H]