Click here to switch to the map view.

The map label for this gene is 119773863

Identifier: 119773863

GI number: 119773863

Start: 890446

End: 891270

Strand: Direct

Name: 119773863

Synonym: Sama_0725

Alternate gene names: NA

Gene position: 890446-891270 (Clockwise)

Preceding gene: 119773859

Following gene: 119773867

Centisome position: 20.68

GC content: 55.76

Gene sequence:

>825_bases
ATGAGTCGTTCCCCCTTCCAAACCTTTGTCTGGCGCAGTGAGATATTTGAATGTCAAAGCACCGACATCCAACGTTTTTA
CAGCTTGCTTGCCATTGAGACAGAGCGCCTTGGTCTTGGCAGCAAAATCCTGGGGCAGGCAGGGCACCATCCGTTGTATC
TGTTGCAATCACCGGGGCAGAAAGCCGGTTTGCCCAATTTGCTTATCAGCGCCGGTTTCCACGGTGAAGAGTCAGCCGGT
CCCTGGGGGCTGCTGCACTTTTTATCGCAGCTGGATGGCGAGCTGTTCAAGCGGGTGAACCTGAGCGTTTTGCCGCTGGT
TAACCCCACTGGGTTTGCCAAAGGGCACAGGTTCAATGAGCTGGGTGAAAACCCCAATCGCGGCTTTTTTATTGAAAATG
GCAAAGCAAAGCCCGGCGCCGATACCTCGGCAGAAGGGCGTATCTTGCTTGAACACGCCCACCTGCTGCAGGTGGCCAGC
CGCGATGGCATCCTCACCTGCCATGAAGATGTGCTGATGACAGACACCTATGTGTATACCTTTGAGCCAAGCCAGGCTCC
GGGGCGTTTCAGCCACAGCTTGCGGGATGCGCTGGGGCAGTATTTCCCCATTGCCGCCGATGGTGACGTCGATAACTGTC
CGGTACGCAGTGGTGTGATTTTCAACCACTTCGATACCTCGTTCGAATCCTTTTTGGTGCGAAGCGGCGCCCGGGTGGGT
TGCTGCAGTGAGACTCCGGGCCAGCAGCCACTGGATCAACGTATCCTGGCCAATGCCGCCGCCATGAACACCTTTGTGAA
TATGCTGGCACCGGAGCTAAGTTAA

Upstream 100 bases:

>100_bases
ATCTTCCCCAAGCCTTTGGAATGGCATTCAGTTTTTCATCATTACTGATATGATGGCAAGAGCTTTCAACCTACTTGTTA
TTAAGCCAAGGATGCCCTTT

Downstream 100 bases:

>100_bases
TCGTTCAGCCCGTGAGCGTGTCAGAGCATAAATAAAAACAGCCACATCGTGTGGCTGTTTTTATTTATCTGGGTGTCAGA
CGAGACCAACTCAGGGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSRSPFQTFVWRSEIFECQSTDIQRFYSLLAIETERLGLGSKILGQAGHHPLYLLQSPGQKAGLPNLLISAGFHGEESAG
PWGLLHFLSQLDGELFKRVNLSVLPLVNPTGFAKGHRFNELGENPNRGFFIENGKAKPGADTSAEGRILLEHAHLLQVAS
RDGILTCHEDVLMTDTYVYTFEPSQAPGRFSHSLRDALGQYFPIAADGDVDNCPVRSGVIFNHFDTSFESFLVRSGARVG
CCSETPGQQPLDQRILANAAAMNTFVNMLAPELS

Sequences:

>Translated_274_residues
MSRSPFQTFVWRSEIFECQSTDIQRFYSLLAIETERLGLGSKILGQAGHHPLYLLQSPGQKAGLPNLLISAGFHGEESAG
PWGLLHFLSQLDGELFKRVNLSVLPLVNPTGFAKGHRFNELGENPNRGFFIENGKAKPGADTSAEGRILLEHAHLLQVAS
RDGILTCHEDVLMTDTYVYTFEPSQAPGRFSHSLRDALGQYFPIAADGDVDNCPVRSGVIFNHFDTSFESFLVRSGARVG
CCSETPGQQPLDQRILANAAAMNTFVNMLAPELS
>Mature_273_residues
SRSPFQTFVWRSEIFECQSTDIQRFYSLLAIETERLGLGSKILGQAGHHPLYLLQSPGQKAGLPNLLISAGFHGEESAGP
WGLLHFLSQLDGELFKRVNLSVLPLVNPTGFAKGHRFNELGENPNRGFFIENGKAKPGADTSAEGRILLEHAHLLQVASR
DGILTCHEDVLMTDTYVYTFEPSQAPGRFSHSLRDALGQYFPIAADGDVDNCPVRSGVIFNHFDTSFESFLVRSGARVGC
CSETPGQQPLDQRILANAAAMNTFVNMLAPELS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30064; Mature: 29933

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSPFQTFVWRSEIFECQSTDIQRFYSLLAIETERLGLGSKILGQAGHHPLYLLQSPGQ
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEECCCC
KAGLPNLLISAGFHGEESAGPWGLLHFLSQLDGELFKRVNLSVLPLVNPTGFAKGHRFNE
CCCCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHH
LGENPNRGFFIENGKAKPGADTSAEGRILLEHAHLLQVASRDGILTCHEDVLMTDTYVYT
HCCCCCCCEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCEEEECCCEEEECEEEEE
FEPSQAPGRFSHSLRDALGQYFPIAADGDVDNCPVRSGVIFNHFDTSFESFLVRSGARVG
ECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCEE
CCSETPGQQPLDQRILANAAAMNTFVNMLAPELS
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SRSPFQTFVWRSEIFECQSTDIQRFYSLLAIETERLGLGSKILGQAGHHPLYLLQSPGQ
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEECCCC
KAGLPNLLISAGFHGEESAGPWGLLHFLSQLDGELFKRVNLSVLPLVNPTGFAKGHRFNE
CCCCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHH
LGENPNRGFFIENGKAKPGADTSAEGRILLEHAHLLQVASRDGILTCHEDVLMTDTYVYT
HCCCCCCCEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCEEEECCCEEEECEEEEE
FEPSQAPGRFSHSLRDALGQYFPIAADGDVDNCPVRSGVIFNHFDTSFESFLVRSGARVG
ECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCEE
CCSETPGQQPLDQRILANAAAMNTFVNMLAPELS
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA