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The map label for this gene is 119773848

Identifier: 119773848

GI number: 119773848

Start: 872846

End: 873709

Strand: Direct

Name: 119773848

Synonym: Sama_0710

Alternate gene names: NA

Gene position: 872846-873709 (Clockwise)

Preceding gene: 119773847

Following gene: 119773849

Centisome position: 20.27

GC content: 55.9

Gene sequence:

>864_bases
ATGGTTAATCTGATTGTGACCTTTTACACCCTGGCGCTGATTTTTTTGCTGGTGTCCTGCGCCCGCATTTACCGGCGGGT
ACCCGAAGAGCGCCGGGAGTTTATGGACCCCCTCACCCCCGGGCTCAAGCTGATTTGGCCGTTGGTGAATGTGGTGGCCT
TTTACTTCAGCGAAAAGCTCAGCGTGGACTATCTGGAGCGTATCGCCAAAAAACTGCAGGTATCCGGTTTATCGTACCTG
ATGACGGCAGAGCAATACTTTGCCATCCGCATCCTGAGCACCCTGTTTGCCACCTTTATTGTGTGGCTGGGTTGTTGGAT
GCTGGACGAACTATCGGCCAACTACCTGCTGCTGGCCGCCATCGCCGGTTACTTTTTGCCCATGCTGACCCTGAACGATC
TACGCCGTACGCGTCAGGAGCAAATCGTCAAGGTGCTGCCGGTGTACCTCGACTATCTGACCATGGCCATTGAGGCCGGA
CTCAACATGTCTGCAGCCATTGCCCAGGCGGTGGAACGCGGCCCCGATGGGCCGCTGAAAATCGAGTTTGAAAAGGTGAT
CCGCGATATGCGTGCGGGTATCTCCCGGGCACAGGCATTTCGCAACATGGCCGACCGGGTCCAGATAAGTGAGCTTAACA
GTCTGGTCAGTGCGCTGGCACAGGCAGAACGTACCGGGGCGAGTCTGGGTTACACCCTGCGGATCCAGGCCGATCAGCGC
CGGGTGGAACGTTTCCAGCGCGCCGAGAAAAAGGCCATGGAAGCGCCCATCAAACTGATGTTCCCCCTTATCATGTTTAT
CTTCCCGGTGACCTTTTTGATCCTCTTGTTCCCCATCCTGTCCAAGTTCCTGTTTGAGATGTGA

Upstream 100 bases:

>100_bases
AGCCCGTGGGCTGGGCCGTGATAGCCGTGTCGTCCCTGTTGCTCTTTGGTGGTTACATGACCATCAAGAAAATCATCACC
ATCGATGTGTAGGAGCGACC

Downstream 100 bases:

>100_bases
CATGAAGCGAGCGCAATTCAAACATGGCCCCAGTGGCAAGGCAATTGAGGTATGGCTCGCCAATACCCCCTGGCTGAGAC
TGAGGGGATTGTTGGGGAGG

Product: putative type II secretion system protein F

Products: NA

Alternate protein names: Type II Secretion System F Domain Protein; Flp Pilus Assembly Protein TadC; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain-Containing Protein; Integral Membrane Protein; Type II Secretion System Protein F; Type II Secretion System F Domain; Flp Pilus Assembly Protein; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein; TadC Protein; Tad Secretion System Secretion Accessory Protein; Tight Adherence TadC-Like Transmembrane Protein; Pilus Component Protein; TadC Pilus Assembly Protein; TadC Family Type II/IV Secretion System Protein; Pilus Assembly Protein TadC; Type II Secretion System; TadC Component Of Type IV Pilus; Type II Secretion System Protein F Domain; Putative Tight Adherence TadC-Like Transmembrane Protein; TadC Subunit; Type II Secretion System Protein F Domain Protein; Components Of Type IV Pilus TadC; Pilus Assemble Protein; Tight Adherence TadC-Related Transmembrane Protein; Component Of Type IV Pilus; Von Willebrand Factor Type A; Component Of Pilus Protein; Type II Secretion System Integral Membrane Subunit; Secretion System Protein TadC; Tyrosine Phenol-Lyase; Components Of Type IV Pilus

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MVNLIVTFYTLALIFLLVSCARIYRRVPEERREFMDPLTPGLKLIWPLVNVVAFYFSEKLSVDYLERIAKKLQVSGLSYL
MTAEQYFAIRILSTLFATFIVWLGCWMLDELSANYLLLAAIAGYFLPMLTLNDLRRTRQEQIVKVLPVYLDYLTMAIEAG
LNMSAAIAQAVERGPDGPLKIEFEKVIRDMRAGISRAQAFRNMADRVQISELNSLVSALAQAERTGASLGYTLRIQADQR
RVERFQRAEKKAMEAPIKLMFPLIMFIFPVTFLILLFPILSKFLFEM

Sequences:

>Translated_287_residues
MVNLIVTFYTLALIFLLVSCARIYRRVPEERREFMDPLTPGLKLIWPLVNVVAFYFSEKLSVDYLERIAKKLQVSGLSYL
MTAEQYFAIRILSTLFATFIVWLGCWMLDELSANYLLLAAIAGYFLPMLTLNDLRRTRQEQIVKVLPVYLDYLTMAIEAG
LNMSAAIAQAVERGPDGPLKIEFEKVIRDMRAGISRAQAFRNMADRVQISELNSLVSALAQAERTGASLGYTLRIQADQR
RVERFQRAEKKAMEAPIKLMFPLIMFIFPVTFLILLFPILSKFLFEM
>Mature_287_residues
MVNLIVTFYTLALIFLLVSCARIYRRVPEERREFMDPLTPGLKLIWPLVNVVAFYFSEKLSVDYLERIAKKLQVSGLSYL
MTAEQYFAIRILSTLFATFIVWLGCWMLDELSANYLLLAAIAGYFLPMLTLNDLRRTRQEQIVKVLPVYLDYLTMAIEAG
LNMSAAIAQAVERGPDGPLKIEFEKVIRDMRAGISRAQAFRNMADRVQISELNSLVSALAQAERTGASLGYTLRIQADQR
RVERFQRAEKKAMEAPIKLMFPLIMFIFPVTFLILLFPILSKFLFEM

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32963; Mature: 32963

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNLIVTFYTLALIFLLVSCARIYRRVPEERREFMDPLTPGLKLIWPLVNVVAFYFSEKL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
SVDYLERIAKKLQVSGLSYLMTAEQYFAIRILSTLFATFIVWLGCWMLDELSANYLLLAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IAGYFLPMLTLNDLRRTRQEQIVKVLPVYLDYLTMAIEAGLNMSAAIAQAVERGPDGPLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEE
IEFEKVIRDMRAGISRAQAFRNMADRVQISELNSLVSALAQAERTGASLGYTLRIQADQR
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHH
RVERFQRAEKKAMEAPIKLMFPLIMFIFPVTFLILLFPILSKFLFEM
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVNLIVTFYTLALIFLLVSCARIYRRVPEERREFMDPLTPGLKLIWPLVNVVAFYFSEKL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
SVDYLERIAKKLQVSGLSYLMTAEQYFAIRILSTLFATFIVWLGCWMLDELSANYLLLAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IAGYFLPMLTLNDLRRTRQEQIVKVLPVYLDYLTMAIEAGLNMSAAIAQAVERGPDGPLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEE
IEFEKVIRDMRAGISRAQAFRNMADRVQISELNSLVSALAQAERTGASLGYTLRIQADQR
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHH
RVERFQRAEKKAMEAPIKLMFPLIMFIFPVTFLILLFPILSKFLFEM
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA