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The map label for this gene is 119773847

Identifier: 119773847

GI number: 119773847

Start: 871986

End: 872837

Strand: Direct

Name: 119773847

Synonym: Sama_0709

Alternate gene names: NA

Gene position: 871986-872837 (Clockwise)

Preceding gene: 119773846

Following gene: 119773848

Centisome position: 20.25

GC content: 55.63

Gene sequence:

>852_bases
ATGGGTGATGTGATGCTCGCCATGGTCCTGGCCTTTGTCTCAGTCACAGTGCTGGTGTGGTCTGCCAAGCATCTGGGTGA
GTCGCTGGCCAAACGATACCGGGAAACCTTTACCACCTCGGCCAGTACCAATCTGGCCGACATGTTCCTGTTCATTGAGC
CGGGCCAGCTGTTTTTGCTGAACGTGCTGACCCTGGTCTCAGTGCCTTTCTTCGGCCGCCTGTTCTTTGGCTCATGGGTG
GTAGGGATATTGCTCAGTGTGCTGTTGGCACTCTTGCCCCGTTATCTCTACCGCTATCTGCATCAAAGGCGCAGACGCAG
GTTTGTGCACCAGTTACCGGACGCGCTGAATATGATTGCGGCGTCGATGCAGGCGGGTGCCAACGTGACCAATGCCATCG
AGTTTATGGCCGATGAAATGGATGCGCCCATCAAGCAGGAGTTCCAGTTGTTTTTGCGTGAGCAGCGGCTGGGGGTGGAG
TTCAACACGGCGCTGGATAACGTCTACAAACGCATCCCCGAGAGCGAGTTTCAGCTGGTCGTTGCAGGGATGCAAATCTC
CCGCGATGTGGGTGGCAACCTGGCCGAGGTGCTGGTGCGGCTGTCTGAAACCCTGCGTAAAAAAATCGAGATGGAAGGCA
AGATCACCTCGCTCACCTCACAGGGCAAGATGCAGGGCATAGTCATGACCCTGTTGCCGGTTGCGATCGGCTTCACCCTG
TATCATATGGAGCCTGTATCCATGGGACGAATCTTAACCGAGCCCGTGGGCTGGGCCGTGATAGCCGTGTCGTCCCTGTT
GCTCTTTGGTGGTTACATGACCATCAAGAAAATCATCACCATCGATGTGTAG

Upstream 100 bases:

>100_bases
GGGTTTTATACCGCCACAGGTACCATTCCCGAGTTTTACGAGTCTCTGCGCCGACGGGGAGTGCGGGTTCAGTTGGATAT
CTTCGACAGGGATGCGCGTT

Downstream 100 bases:

>100_bases
GAGCGACCATGGTTAATCTGATTGTGACCTTTTACACCCTGGCGCTGATTTTTTTGCTGGTGTCCTGCGCCCGCATTTAC
CGGCGGGTACCCGAAGAGCG

Product: putative type II secretion system protein F

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Integral Membrane Protein; Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Type II Secretion System Protein F; Pilus Assembly Protein TadB; TadB Protein; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain; Type II Secretion System; Type II/IV Secretion System Protein TadC Subfamily; Tad Secretion System Pilus Assembly Protein; Secretion System Protein; Bacterial Type II Secretion System Protein F; MaoC Protein; Type II Secretion System Protein F Domain; Flp Pilus Assembly Protein TadC; TadB-Like Pilus Assembly Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Tight Adherence TadB-Like Transmembrane Protein; Secretion System Protein TadB; Tight Adherence TadB-Related Transmembrane Protein; Transmembrane Pilus Component Protein; Tight Adherance Operon Protein; Components Of Type IV Pilus; Bacterial Type II Secretion System Protein F Domain Protein

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MGDVMLAMVLAFVSVTVLVWSAKHLGESLAKRYRETFTTSASTNLADMFLFIEPGQLFLLNVLTLVSVPFFGRLFFGSWV
VGILLSVLLALLPRYLYRYLHQRRRRRFVHQLPDALNMIAASMQAGANVTNAIEFMADEMDAPIKQEFQLFLREQRLGVE
FNTALDNVYKRIPESEFQLVVAGMQISRDVGGNLAEVLVRLSETLRKKIEMEGKITSLTSQGKMQGIVMTLLPVAIGFTL
YHMEPVSMGRILTEPVGWAVIAVSSLLLFGGYMTIKKIITIDV

Sequences:

>Translated_283_residues
MGDVMLAMVLAFVSVTVLVWSAKHLGESLAKRYRETFTTSASTNLADMFLFIEPGQLFLLNVLTLVSVPFFGRLFFGSWV
VGILLSVLLALLPRYLYRYLHQRRRRRFVHQLPDALNMIAASMQAGANVTNAIEFMADEMDAPIKQEFQLFLREQRLGVE
FNTALDNVYKRIPESEFQLVVAGMQISRDVGGNLAEVLVRLSETLRKKIEMEGKITSLTSQGKMQGIVMTLLPVAIGFTL
YHMEPVSMGRILTEPVGWAVIAVSSLLLFGGYMTIKKIITIDV
>Mature_282_residues
GDVMLAMVLAFVSVTVLVWSAKHLGESLAKRYRETFTTSASTNLADMFLFIEPGQLFLLNVLTLVSVPFFGRLFFGSWVV
GILLSVLLALLPRYLYRYLHQRRRRRFVHQLPDALNMIAASMQAGANVTNAIEFMADEMDAPIKQEFQLFLREQRLGVEF
NTALDNVYKRIPESEFQLVVAGMQISRDVGGNLAEVLVRLSETLRKKIEMEGKITSLTSQGKMQGIVMTLLPVAIGFTLY
HMEPVSMGRILTEPVGWAVIAVSSLLLFGGYMTIKKIITIDV

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31758; Mature: 31627

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GDVMLAMVLAFVSVTVLVWSAKHLGESLAKRYRETFTTSASTNLADMFLFIEPGQLFLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCHHHHH
NVLTLVSVPFFGRLFFGSWVVGILLSVLLALLPRYLYRYLHQRRRRRFVHQLPDALNMIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASMQAGANVTNAIEFMADEMDAPIKQEFQLFLREQRLGVEFNTALDNVYKRIPESEFQLV
HHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH
VAGMQISRDVGGNLAEVLVRLSETLRKKIEMEGKITSLTSQGKMQGIVMTLLPVAIGFTL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHH
YHMEPVSMGRILTEPVGWAVIAVSSLLLFGGYMTIKKIITIDV
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA