Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773832

Identifier: 119773832

GI number: 119773832

Start: 858008

End: 858559

Strand: Direct

Name: 119773832

Synonym: Sama_0694

Alternate gene names: NA

Gene position: 858008-858559 (Clockwise)

Preceding gene: 119773831

Following gene: 119773833

Centisome position: 19.93

GC content: 57.97

Gene sequence:

>552_bases
ATGACCAAGAAGAACCCCTTGCTGAGGGCCTTGCCCTGTGCCCTGGGGCTGGCAATGGCCGGTGCTGTGGCACCGCTTTA
TGCCTCAGATACTCAGGCTTTGCTGGACGATGCACTCAGCGCCGCACCTCCCACCTTGAGGGACAAGGTGACAGTGATGG
ACTGGCAACACAATGTGCTGCAACAGGGCAGCAGTAACTATACCTGTTTCCCCACGCCGCCCAGTCTGCAGGGAAAGGCG
CCCATGTGTATGGACGGACCCTGGATGATGTGGGCCGATGCCTGGTCCAATAAAAAGCCGTTTCAGGCCAAGTCGATAGG
TATTTCCTATATGCTGGCCGGTGATGGCGGCGCCAGCAATACAGACCCCTTCGCCGAGGGCAAGACAGAGGACAATCAGT
GGATAGTCGAAGGCCCGCACCTGATGATTATTACCCCCGATGCCGCCCTGTTGGACAGTCTGCCAACCGATCCCTATGAG
GGTGGCCCCTATGTGATGTGGAAAGGGACGCCCTATGCCCACATCATGGTGCCGGTGGGACCGAGAAAGTAA

Upstream 100 bases:

>100_bases
GTAACAACACCGGAAAACAGTTACCGGAAGTAGGTATTCAGAGGCAAGGGGTTGCCTGAGAGCATATCCAGGGACGTTTC
ACTCATCAGAGGATAGTGTT

Downstream 100 bases:

>100_bases
CCAGTCAAACGCCCATTCAGGGCGTTTTTTATAGACAGAATTCAGGATGCATGGCCTTTTTGCGCCATTGCATGCAAATC
AATGTCTCTCCTCCATAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MTKKNPLLRALPCALGLAMAGAVAPLYASDTQALLDDALSAAPPTLRDKVTVMDWQHNVLQQGSSNYTCFPTPPSLQGKA
PMCMDGPWMMWADAWSNKKPFQAKSIGISYMLAGDGGASNTDPFAEGKTEDNQWIVEGPHLMIITPDAALLDSLPTDPYE
GGPYVMWKGTPYAHIMVPVGPRK

Sequences:

>Translated_183_residues
MTKKNPLLRALPCALGLAMAGAVAPLYASDTQALLDDALSAAPPTLRDKVTVMDWQHNVLQQGSSNYTCFPTPPSLQGKA
PMCMDGPWMMWADAWSNKKPFQAKSIGISYMLAGDGGASNTDPFAEGKTEDNQWIVEGPHLMIITPDAALLDSLPTDPYE
GGPYVMWKGTPYAHIMVPVGPRK
>Mature_182_residues
TKKNPLLRALPCALGLAMAGAVAPLYASDTQALLDDALSAAPPTLRDKVTVMDWQHNVLQQGSSNYTCFPTPPSLQGKAP
MCMDGPWMMWADAWSNKKPFQAKSIGISYMLAGDGGASNTDPFAEGKTEDNQWIVEGPHLMIITPDAALLDSLPTDPYEG
GPYVMWKGTPYAHIMVPVGPRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19734; Mature: 19603

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKNPLLRALPCALGLAMAGAVAPLYASDTQALLDDALSAAPPTLRDKVTVMDWQHNVL
CCCCCCHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHCCCCCCCCEEEEECCCHHHH
QQGSSNYTCFPTPPSLQGKAPMCMDGPWMMWADAWSNKKPFQAKSIGISYMLAGDGGASN
HCCCCCEEEECCCCCCCCCCCEEECCCEEEEEECCCCCCCCEEECCCEEEEEECCCCCCC
TDPFAEGKTEDNQWIVEGPHLMIITPDAALLDSLPTDPYEGGPYVMWKGTPYAHIMVPVG
CCCCCCCCCCCCEEEEECCEEEEECCCHHHHHCCCCCCCCCCCEEEECCCCEEEEEEECC
PRK
CCC
>Mature Secondary Structure 
TKKNPLLRALPCALGLAMAGAVAPLYASDTQALLDDALSAAPPTLRDKVTVMDWQHNVL
CCCCCHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHCCCCCCCCEEEEECCCHHHH
QQGSSNYTCFPTPPSLQGKAPMCMDGPWMMWADAWSNKKPFQAKSIGISYMLAGDGGASN
HCCCCCEEEECCCCCCCCCCCEEECCCEEEEEECCCCCCCCEEECCCEEEEEECCCCCCC
TDPFAEGKTEDNQWIVEGPHLMIITPDAALLDSLPTDPYEGGPYVMWKGTPYAHIMVPVG
CCCCCCCCCCCCEEEEECCEEEEECCCHHHHHCCCCCCCCCCCEEEECCCCEEEEEEECC
PRK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA