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The map label for this gene is yaaH [H]

Identifier: 119773833

GI number: 119773833

Start: 858948

End: 859550

Strand: Direct

Name: yaaH [H]

Synonym: Sama_0695

Alternate gene names: 119773833

Gene position: 858948-859550 (Clockwise)

Preceding gene: 119773832

Following gene: 119773837

Centisome position: 19.95

GC content: 55.22

Gene sequence:

>603_bases
ATGTCCACCCCTCTGGCCAACCCCGCCCCACTCGGGCTGATGGGCTTTGGCATGACCACCATTTTGCTCAATATCCACAA
TGCCGGTTTCTTTCCCATCGATGCCATGATCCTGGCCATGGGGATTTTTTACGGCGGTTTGGGGCAGGTAATAGTCGGTA
TCATGTGTTTCATGCGTGGCGATACCTTCGGTACAACGGCCTTTACCTCCTACGGCCTGTTCTGGCTGACGCTGGTGGGG
TTGATTTTAATGCCAAACGCCGGCGTGGCAGCGAGCCCAGCATCCTTTATGGGTTGGTATCTGGCACTGTGGGGTGTGTT
CACTGGCTTTATGTTTATTGGTTCGCTGCGCTACGCCCGCATCAAGCAGTTTATTTTCGGTTCCCTGACGCTGCTGTTTT
TCCTGCTGGCAGCCCGTGATTTCACCGGCAGTGAACTGATTGGCACCATCGCCGCCTGGGAAGGAATTATCTGTGGCGCA
TCAGCCATTTACTTTGCCATGGCGCAGGTGATTAATGGTGAGTATGGCCGCACTGTACTGCCCGTTGGTGAACGCAAGGT
CAAGGCGCCAGTGGTTGCCGTGAGCGAAGCCAAAGCCGCCTGA

Upstream 100 bases:

>100_bases
AGAATGCGCCGCCCTCTCAGCCTTCCCGTGCTGCAGCAGGTACACCAGATCCCGACCCGTGGCATCAGCTTGCCGCTGGT
TTTTTACTCAGGAGTTAACT

Downstream 100 bases:

>100_bases
CGCCAGCAGCCTTCACTATTGCGAGAAGCTAAAAATGCCCTGTCATACAGGGCATTTTTGTTTTTGTGTGGGGAATGAGA
TAGCTCAGTCACCCACTTTT

Product: gpr1/fun34/YaaH family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MSTPLANPAPLGLMGFGMTTILLNIHNAGFFPIDAMILAMGIFYGGLGQVIVGIMCFMRGDTFGTTAFTSYGLFWLTLVG
LILMPNAGVAASPASFMGWYLALWGVFTGFMFIGSLRYARIKQFIFGSLTLLFFLLAARDFTGSELIGTIAAWEGIICGA
SAIYFAMAQVINGEYGRTVLPVGERKVKAPVVAVSEAKAA

Sequences:

>Translated_200_residues
MSTPLANPAPLGLMGFGMTTILLNIHNAGFFPIDAMILAMGIFYGGLGQVIVGIMCFMRGDTFGTTAFTSYGLFWLTLVG
LILMPNAGVAASPASFMGWYLALWGVFTGFMFIGSLRYARIKQFIFGSLTLLFFLLAARDFTGSELIGTIAAWEGIICGA
SAIYFAMAQVINGEYGRTVLPVGERKVKAPVVAVSEAKAA
>Mature_199_residues
STPLANPAPLGLMGFGMTTILLNIHNAGFFPIDAMILAMGIFYGGLGQVIVGIMCFMRGDTFGTTAFTSYGLFWLTLVGL
ILMPNAGVAASPASFMGWYLALWGVFTGFMFIGSLRYARIKQFIFGSLTLLFFLLAARDFTGSELIGTIAAWEGIICGAS
AIYFAMAQVINGEYGRTVLPVGERKVKAPVVAVSEAKAA

Specific function: Unknown

COG id: COG1584

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GPR1/FUN34/yaaH family [H]

Homologues:

Organism=Escherichia coli, GI1786191, Length=186, Percent_Identity=61.2903225806452, Blast_Score=228, Evalue=3e-61,
Organism=Saccharomyces cerevisiae, GI6324329, Length=149, Percent_Identity=35.5704697986577, Blast_Score=70, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6319855, Length=111, Percent_Identity=37.8378378378378, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000791 [H]

Pfam domain/function: PF01184 Grp1_Fun34_YaaH [H]

EC number: NA

Molecular weight: Translated: 21312; Mature: 21180

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS01114 GPR1_FUN34_YAAH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPLANPAPLGLMGFGMTTILLNIHNAGFFPIDAMILAMGIFYGGLGQVIVGIMCFMRG
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
DTFGTTAFTSYGLFWLTLVGLILMPNAGVAASPASFMGWYLALWGVFTGFMFIGSLRYAR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKQFIFGSLTLLFFLLAARDFTGSELIGTIAAWEGIICGASAIYFAMAQVINGEYGRTVL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEC
PVGERKVKAPVVAVSEAKAA
CCCCCHHHCCEEEECCCCCC
>Mature Secondary Structure 
STPLANPAPLGLMGFGMTTILLNIHNAGFFPIDAMILAMGIFYGGLGQVIVGIMCFMRG
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
DTFGTTAFTSYGLFWLTLVGLILMPNAGVAASPASFMGWYLALWGVFTGFMFIGSLRYAR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKQFIFGSLTLLFFLLAARDFTGSELIGTIAAWEGIICGASAIYFAMAQVINGEYGRTVL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEC
PVGERKVKAPVVAVSEAKAA
CCCCCHHHCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]