| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is b2999 [C]
Identifier: 119773751
GI number: 119773751
Start: 766446
End: 767180
Strand: Direct
Name: b2999 [C]
Synonym: Sama_0613
Alternate gene names: 119773751
Gene position: 766446-767180 (Clockwise)
Preceding gene: 119773750
Following gene: 119773753
Centisome position: 17.8
GC content: 57.69
Gene sequence:
>735_bases ATGCGCGTCTGTGCCGAACACCATGTTATCAATACTGCCACCGGCCCCATGGGCACCCGGGTTTATCGACCCGCAGGGCC GGGTAGCTATCCCGCAATTTTGTTTTATTCTGAGATTTTTCAGGAAACCGCGCCCATCAGCCGCATGGCCACAGTGCTGG CAGGGCACGGGTTTGTTGTCTTGGTGCCGGAAATCTTTCACGAGCTTAACCCTGCCGGGACCGTGCTCGGTTACGATGAT ATGGGGAAAGACAAGGGCAACAGCGACAAGGCTACCAAGCCTCTCGAAAGCCACGACTCTGATACCGCAGCCATGGTGGA CTTTGTTCGCCGTCAGCCCTGGTGTCAGGGCAAAATTGGCGCCATGGGTGTGTGCATTGGCGGTCATCTGGCGTATCGCG CTGCGGTTAATCCGGATGTGGCAGCGGCCTTTTGCCTGTATGCCACTGATATCCACTCGGGCACCATACCCAGTCAACCG GGCAATGACTCACTCAGTCGTACCCGCGATATTCGTGGCGAACTCTATATGGTGTTTGGCAAACAGGACCCCCACGTGCC GGGCGAGGGCCGCAGGCTCATCCAGCACAATCTGGAGCAACACGGAGTGAATCACAGCTGGCTTGAAGTGAATGCCGAGC ATGCCTTTATGCGGGACGGCGATGCCCGTCACGACCCGGCACTGGCGCTGGTAATGTACCAAAGCGCCATAGCGCTGTTC CAGCGAACCCTCTAA
Upstream 100 bases:
>100_bases GCCGGTGAGCGCTGCGGTAACGAACTTTTCTGATACGCGGCGCTGACAGCGGCAACGGGGCTTGCTAGATTGAGTGCAGT TTCTCTTTCAGGAGGTCCCG
Downstream 100 bases:
>100_bases TAGAAAAAGCGGCCAAGAGGCCGCTTTTTCTTTCTGTTTGTTAATTTACGCAGTTGTTCTTTTGGGGCGGGTTAGGGCGC CTTGGGTTGTGACTTTTGCT
Product: dienelactone hydrolase
Products: NA
Alternate protein names: Dienelactone hydrolase; DLH [H]
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MRVCAEHHVINTATGPMGTRVYRPAGPGSYPAILFYSEIFQETAPISRMATVLAGHGFVVLVPEIFHELNPAGTVLGYDD MGKDKGNSDKATKPLESHDSDTAAMVDFVRRQPWCQGKIGAMGVCIGGHLAYRAAVNPDVAAAFCLYATDIHSGTIPSQP GNDSLSRTRDIRGELYMVFGKQDPHVPGEGRRLIQHNLEQHGVNHSWLEVNAEHAFMRDGDARHDPALALVMYQSAIALF QRTL
Sequences:
>Translated_244_residues MRVCAEHHVINTATGPMGTRVYRPAGPGSYPAILFYSEIFQETAPISRMATVLAGHGFVVLVPEIFHELNPAGTVLGYDD MGKDKGNSDKATKPLESHDSDTAAMVDFVRRQPWCQGKIGAMGVCIGGHLAYRAAVNPDVAAAFCLYATDIHSGTIPSQP GNDSLSRTRDIRGELYMVFGKQDPHVPGEGRRLIQHNLEQHGVNHSWLEVNAEHAFMRDGDARHDPALALVMYQSAIALF QRTL >Mature_244_residues MRVCAEHHVINTATGPMGTRVYRPAGPGSYPAILFYSEIFQETAPISRMATVLAGHGFVVLVPEIFHELNPAGTVLGYDD MGKDKGNSDKATKPLESHDSDTAAMVDFVRRQPWCQGKIGAMGVCIGGHLAYRAAVNPDVAAAFCLYATDIHSGTIPSQP GNDSLSRTRDIRGELYMVFGKQDPHVPGEGRRLIQHNLEQHGVNHSWLEVNAEHAFMRDGDARHDPALALVMYQSAIALF QRTL
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dienelactone hydrolase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320117, Length=257, Percent_Identity=37.3540856031128, Blast_Score=159, Evalue=5e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 [H]
Pfam domain/function: PF01738 DLH [H]
EC number: =3.1.1.45 [H]
Molecular weight: Translated: 26663; Mature: 26663
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVCAEHHVINTATGPMGTRVYRPAGPGSYPAILFYSEIFQETAPISRMATVLAGHGFVV CCCCCCCCEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCEEE LVPEIFHELNPAGTVLGYDDMGKDKGNSDKATKPLESHDSDTAAMVDFVRRQPWCQGKIG EHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC AMGVCIGGHLAYRAAVNPDVAAAFCLYATDIHSGTIPSQPGNDSLSRTRDIRGELYMVFG EEEEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCEEEEEEC KQDPHVPGEGRRLIQHNLEQHGVNHSWLEVNAEHAFMRDGDARHDPALALVMYQSAIALF CCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHH QRTL HHCC >Mature Secondary Structure MRVCAEHHVINTATGPMGTRVYRPAGPGSYPAILFYSEIFQETAPISRMATVLAGHGFVV CCCCCCCCEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCEEE LVPEIFHELNPAGTVLGYDDMGKDKGNSDKATKPLESHDSDTAAMVDFVRRQPWCQGKIG EHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC AMGVCIGGHLAYRAAVNPDVAAAFCLYATDIHSGTIPSQPGNDSLSRTRDIRGELYMVFG EEEEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCEEEEEEC KQDPHVPGEGRRLIQHNLEQHGVNHSWLEVNAEHAFMRDGDARHDPALALVMYQSAIALF CCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHH QRTL HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]