Click here to switch to the map view.

The map label for this gene is 119773600

Identifier: 119773600

GI number: 119773600

Start: 566805

End: 567410

Strand: Direct

Name: 119773600

Synonym: Sama_0460

Alternate gene names: NA

Gene position: 566805-567410 (Clockwise)

Preceding gene: 119773599

Following gene: 119773601

Centisome position: 13.16

GC content: 53.3

Gene sequence:

>606_bases
ATGAAAGCTAAACAGCAGGGATTTTCACTGATTGAGCTGGTGATAGTCATAGTGATTCTTGGGCTATTGGCGGCAACCGC
CATTCCCAGATTTTTGAACATCACCGATGAAGCAGAAGCGGCCAGCGTGGATGCGGTCAGCGGTGGCTTGGTTACGGCAG
TAAGTTTCGTGCGCGCCCAATGGGAAATCGATGGTCGCAACAACGACTATGTGTTGCTGGATGGCACCCAAATAGGGCTC
GACAAGCGCTTTGGCTACCCCACCGGCGATAATAATGTGTCCGCCACTGACATGACAGATGCCACCTGCCAGCAGGTATT
TAACCTGATTTTGCAAAGCACGCCCCGTAATGTGCTTTACACCCAGGATGCCCGTAAGCAACGTTATACCGTGAGGGCAA
TTGGCGGCGCGGGTGGCAGTAGTAACGATCTCAATGGTCAAACGGTCAATGGCCTGGATTTGTGTGTGTACCATCAGGTG
TCATCTCTGACCCTGGACCCCAACACCGGCATTGCCAACCCGGTACCGGATCTGACTACGTCAGGCGCTTCAGGTATTAC
CTATAATCCGGGTACCGGCAAGGTGCTCAGCTTCACCAACCCCTGA

Upstream 100 bases:

>100_bases
AAAGTGACCTTGGTCAACCATACTAATTAGCTGTTATATATGAGACTTTTCAAGATGAATTTAGCTGCTACAATGGGGAA
ATGGACGATTGGGGGCACCT

Downstream 100 bases:

>100_bases
ATGTCAGGCAAGTTAATTTCACAGAAAGGTAAGAAAGCATGAAAAAACAGCAAGGTTTTACCCTGATTGAGTTGGTGGTG
GTGATCATCATCCTGGGCAT

Product: MSHA pilin protein MshB

Products: NA

Alternate protein names: Methylation Site Containing Protein; Pilin Protein; Mannose-Sensitive Agglutinin; Prepilin-Type Cleavage/Methylation; Msha Pilin Protein Mshb; Methylation

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MKAKQQGFSLIELVIVIVILGLLAATAIPRFLNITDEAEAASVDAVSGGLVTAVSFVRAQWEIDGRNNDYVLLDGTQIGL
DKRFGYPTGDNNVSATDMTDATCQQVFNLILQSTPRNVLYTQDARKQRYTVRAIGGAGGSSNDLNGQTVNGLDLCVYHQV
SSLTLDPNTGIANPVPDLTTSGASGITYNPGTGKVLSFTNP

Sequences:

>Translated_201_residues
MKAKQQGFSLIELVIVIVILGLLAATAIPRFLNITDEAEAASVDAVSGGLVTAVSFVRAQWEIDGRNNDYVLLDGTQIGL
DKRFGYPTGDNNVSATDMTDATCQQVFNLILQSTPRNVLYTQDARKQRYTVRAIGGAGGSSNDLNGQTVNGLDLCVYHQV
SSLTLDPNTGIANPVPDLTTSGASGITYNPGTGKVLSFTNP
>Mature_201_residues
MKAKQQGFSLIELVIVIVILGLLAATAIPRFLNITDEAEAASVDAVSGGLVTAVSFVRAQWEIDGRNNDYVLLDGTQIGL
DKRFGYPTGDNNVSATDMTDATCQQVFNLILQSTPRNVLYTQDARKQRYTVRAIGGAGGSSNDLNGQTVNGLDLCVYHQV
SSLTLDPNTGIANPVPDLTTSGASGITYNPGTGKVLSFTNP

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21282; Mature: 21282

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAKQQGFSLIELVIVIVILGLLAATAIPRFLNITDEAEAASVDAVSGGLVTAVSFVRAQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHE
WEIDGRNNDYVLLDGTQIGLDKRFGYPTGDNNVSATDMTDATCQQVFNLILQSTPRNVLY
EEECCCCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
TQDARKQRYTVRAIGGAGGSSNDLNGQTVNGLDLCVYHQVSSLTLDPNTGIANPVPDLTT
ECCCCHHEEEEEEEECCCCCCCCCCCCEECCEEEEEEEHHHHEEECCCCCCCCCCCCCCC
SGASGITYNPGTGKVLSFTNP
CCCCCCEECCCCCCEEEECCC
>Mature Secondary Structure
MKAKQQGFSLIELVIVIVILGLLAATAIPRFLNITDEAEAASVDAVSGGLVTAVSFVRAQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHE
WEIDGRNNDYVLLDGTQIGLDKRFGYPTGDNNVSATDMTDATCQQVFNLILQSTPRNVLY
EEECCCCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
TQDARKQRYTVRAIGGAGGSSNDLNGQTVNGLDLCVYHQVSSLTLDPNTGIANPVPDLTT
ECCCCHHEEEEEEEECCCCCCCCCCCCEECCEEEEEEEHHHHEEECCCCCCCCCCCCCCC
SGASGITYNPGTGKVLSFTNP
CCCCCCEECCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA