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The map label for this gene is 119773475

Identifier: 119773475

GI number: 119773475

Start: 401045

End: 402787

Strand: Reverse

Name: 119773475

Synonym: Sama_0334

Alternate gene names: NA

Gene position: 402787-401045 (Counterclockwise)

Preceding gene: 119773483

Following gene: 119773473

Centisome position: 9.35

GC content: 51.92

Gene sequence:

>1743_bases
ATGGGATTTCATCACCGGATTTGCGGCCTGCTGCTGTGGCTTTTGCCACTGCTCGTGCTCGCCCGGGAGCCAATGGATGA
AATCAGTACACTGGTCTTTCAGTATCCGGCGGAAGCCAAGTCTCAAATTGCTCTTCTGGAAGATGAATTCAGACATTCCC
CAACGACGGACCTAAACAACCTGCGACTCAAGCTGCTTAAGTGTGAACTGCTGCTGGAGCAAGGAGATAACGAGGCCGCC
ATCAATCTGGCCCAAATGGGCGAGGCTACCGCCAAGCGGCTTGGCGTTGAATATGCCAGACCTTATTTTATTGCTTGTCT
GGCCAATGCTTATAGCCGTTACAACAACGTGCAGGTAGCACTGCCACAATTGGACACGGCCGTCACCCTTGCCAAGCGCT
ACCAACAACCCCAAGCATTGATACTGGCGCTGAGGTTAAGGGGACAGCTGGATACGGAAGCAGAGAACTACACCTCCGCA
ATTGAAGACCTGCGCGTAGCACTGGACGCTTATGAAGGCATACAAAACCAGCAACAAAACTGGATATGGCCACCAAAAGC
GCTGACGTACGGTGCCATGGGGCAACTGATGTATGCCACAGGCGACCTGACTCAGGCCCGCCATTACAACAACCTCGGGC
TGGAGCACTTAGACAGTAAAGGTAAAGTTCGCCTGGAATTGCTGCTAAACGCTGCCGAGATTGCCATCGCCTCGGACAAG
GACGGGGATAGTGCAGATTACCTGGCCCAGGCAAGAAAATTACTGCCAGAACTGAGCACTCCACTGGAGCTGGCGCTCGG
CTACAGTCGCATAGCGTCCATCGAACTGACTCGAGGTCGTCCCGACATAGCTGAAGACCTGCTTAATATCGCGTTAAATA
CCTTTATTCAGCAACAAAATCAGCTATATGCCATGAGGGTTCAAGGGTTGCTCGCGCAGGTGGAGTTTGCCAAGAATAAT
CACCCGGCAGCGTTAAAGTTGATGTCTCAGGCTATTGCCACAGCGCAGCAACTGCAGCTTTATTCTGAGCAGGCCAAATA
CCAGCTGCAACTTGCCAGGTTCCATGAGTCTCAGGGGCAATTCGAAAAGGCATTTCAAACACTCGATAAAAGCCTTCAGG
CAACAGTCCAAGCCCACCGCCTCATAAATCAAACCCGCACTCAGCAACTTAATACCCGCCTGGGTCAGCGCAGCCTGAAT
GCCGACTTCGAACTCAATCCTTTGTCATCATTTCCCGGACAAAGTAATTTAAGCTGGGTTTACAACCTGATGCTGGTGAT
GATTTCCCTGCTGCTGGCGTTGGTGGTATGGCAAATGACGAGACAGTTCAGCAGCCGTCCTGCAGAGGACAATGTGCCCC
AATCCCCTGTTCAATGGCTGGAGCAGGCAATGCTGCACGCCAAACGCGGTGGTCATCCATTGTCGGTTCTGTTATTGGGG
GTAAAAAACCTGGACACTCAGGAGATAAAAAACCTGACGGCGGCCCTGAAACTCAGACTCAGGGAAACAGACAGCCTCTA
CCTGCTCAATGACAATGAGATATTAATCCTCTTGCCCTATACCAGTAATCAGGGTGCCGATTTGGTTGTTCAGCAGCTCA
GCCCCGCGCTGGTACCATGGCAAGACAGAAAAATTCTTCTTGGCCAAGCCAGTATGCACCAATTTGATACCTCAGAAACC
CTGCTCAAACGTGCCACCACCCGAGGCATGACCCGCAGCACACTGATGACTAATCCCCACTGA

Upstream 100 bases:

>100_bases
TCAATACCTGCCGTAGGCGGGTCTCGTCAGCTTTATGCAAACATGACAGCGAAATTGCTATACTGTCGGCCCTATAAAAG
TCGCTGGCTATTGGAGAACT

Downstream 100 bases:

>100_bases
TGTAAGCGGCTATCTCGTCGAGAAACTCACCACCAAACCGAGCCAGCTTACGTTCACCCACACCGTTAACGGCTAACAGC
TCAGCCTCTGATTTGGGCAG

Product: tetratricopeptide TPR_2

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Domain-Containing Protein

Number of amino acids: Translated: 580; Mature: 579

Protein sequence:

>580_residues
MGFHHRICGLLLWLLPLLVLAREPMDEISTLVFQYPAEAKSQIALLEDEFRHSPTTDLNNLRLKLLKCELLLEQGDNEAA
INLAQMGEATAKRLGVEYARPYFIACLANAYSRYNNVQVALPQLDTAVTLAKRYQQPQALILALRLRGQLDTEAENYTSA
IEDLRVALDAYEGIQNQQQNWIWPPKALTYGAMGQLMYATGDLTQARHYNNLGLEHLDSKGKVRLELLLNAAEIAIASDK
DGDSADYLAQARKLLPELSTPLELALGYSRIASIELTRGRPDIAEDLLNIALNTFIQQQNQLYAMRVQGLLAQVEFAKNN
HPAALKLMSQAIATAQQLQLYSEQAKYQLQLARFHESQGQFEKAFQTLDKSLQATVQAHRLINQTRTQQLNTRLGQRSLN
ADFELNPLSSFPGQSNLSWVYNLMLVMISLLLALVVWQMTRQFSSRPAEDNVPQSPVQWLEQAMLHAKRGGHPLSVLLLG
VKNLDTQEIKNLTAALKLRLRETDSLYLLNDNEILILLPYTSNQGADLVVQQLSPALVPWQDRKILLGQASMHQFDTSET
LLKRATTRGMTRSTLMTNPH

Sequences:

>Translated_580_residues
MGFHHRICGLLLWLLPLLVLAREPMDEISTLVFQYPAEAKSQIALLEDEFRHSPTTDLNNLRLKLLKCELLLEQGDNEAA
INLAQMGEATAKRLGVEYARPYFIACLANAYSRYNNVQVALPQLDTAVTLAKRYQQPQALILALRLRGQLDTEAENYTSA
IEDLRVALDAYEGIQNQQQNWIWPPKALTYGAMGQLMYATGDLTQARHYNNLGLEHLDSKGKVRLELLLNAAEIAIASDK
DGDSADYLAQARKLLPELSTPLELALGYSRIASIELTRGRPDIAEDLLNIALNTFIQQQNQLYAMRVQGLLAQVEFAKNN
HPAALKLMSQAIATAQQLQLYSEQAKYQLQLARFHESQGQFEKAFQTLDKSLQATVQAHRLINQTRTQQLNTRLGQRSLN
ADFELNPLSSFPGQSNLSWVYNLMLVMISLLLALVVWQMTRQFSSRPAEDNVPQSPVQWLEQAMLHAKRGGHPLSVLLLG
VKNLDTQEIKNLTAALKLRLRETDSLYLLNDNEILILLPYTSNQGADLVVQQLSPALVPWQDRKILLGQASMHQFDTSET
LLKRATTRGMTRSTLMTNPH
>Mature_579_residues
GFHHRICGLLLWLLPLLVLAREPMDEISTLVFQYPAEAKSQIALLEDEFRHSPTTDLNNLRLKLLKCELLLEQGDNEAAI
NLAQMGEATAKRLGVEYARPYFIACLANAYSRYNNVQVALPQLDTAVTLAKRYQQPQALILALRLRGQLDTEAENYTSAI
EDLRVALDAYEGIQNQQQNWIWPPKALTYGAMGQLMYATGDLTQARHYNNLGLEHLDSKGKVRLELLLNAAEIAIASDKD
GDSADYLAQARKLLPELSTPLELALGYSRIASIELTRGRPDIAEDLLNIALNTFIQQQNQLYAMRVQGLLAQVEFAKNNH
PAALKLMSQAIATAQQLQLYSEQAKYQLQLARFHESQGQFEKAFQTLDKSLQATVQAHRLINQTRTQQLNTRLGQRSLNA
DFELNPLSSFPGQSNLSWVYNLMLVMISLLLALVVWQMTRQFSSRPAEDNVPQSPVQWLEQAMLHAKRGGHPLSVLLLGV
KNLDTQEIKNLTAALKLRLRETDSLYLLNDNEILILLPYTSNQGADLVVQQLSPALVPWQDRKILLGQASMHQFDTSETL
LKRATTRGMTRSTLMTNPH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65283; Mature: 65152

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFHHRICGLLLWLLPLLVLAREPMDEISTLVFQYPAEAKSQIALLEDEFRHSPTTDLNN
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHH
LRLKLLKCELLLEQGDNEAAINLAQMGEATAKRLGVEYARPYFIACLANAYSRYNNVQVA
HHHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHCCCCEEE
LPQLDTAVTLAKRYQQPQALILALRLRGQLDTEAENYTSAIEDLRVALDAYEGIQNQQQN
CCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
WIWPPKALTYGAMGQLMYATGDLTQARHYNNLGLEHLDSKGKVRLELLLNAAEIAIASDK
CCCCCHHHHHHHHHHHHEECCCHHHHHHCCCCCHHHCCCCCCEEEEEEECHHHEEEECCC
DGDSADYLAQARKLLPELSTPLELALGYSRIASIELTRGRPDIAEDLLNIALNTFIQQQN
CCCHHHHHHHHHHHHHHCCCCHHHHHCHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHH
QLYAMRVQGLLAQVEFAKNNHPAALKLMSQAIATAQQLQLYSEQAKYQLQLARFHESQGQ
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
FEKAFQTLDKSLQATVQAHRLINQTRTQQLNTRLGQRSLNADFELNPLSSFPGQSNLSWV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHH
YNLMLVMISLLLALVVWQMTRQFSSRPAEDNVPQSPVQWLEQAMLHAKRGGHPLSVLLLG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
VKNLDTQEIKNLTAALKLRLRETDSLYLLNDNEILILLPYTSNQGADLVVQQLSPALVPW
CCCCCHHHHHHHHHHHHHHEECCCCEEEECCCCEEEEEECCCCCCHHHHHHHCCCCCCCC
QDRKILLGQASMHQFDTSETLLKRATTRGMTRSTLMTNPH
CCCEEEEECCHHHHCCCHHHHHHHHHHCCCCHHCCCCCCC
>Mature Secondary Structure 
GFHHRICGLLLWLLPLLVLAREPMDEISTLVFQYPAEAKSQIALLEDEFRHSPTTDLNN
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHH
LRLKLLKCELLLEQGDNEAAINLAQMGEATAKRLGVEYARPYFIACLANAYSRYNNVQVA
HHHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHCCCCEEE
LPQLDTAVTLAKRYQQPQALILALRLRGQLDTEAENYTSAIEDLRVALDAYEGIQNQQQN
CCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
WIWPPKALTYGAMGQLMYATGDLTQARHYNNLGLEHLDSKGKVRLELLLNAAEIAIASDK
CCCCCHHHHHHHHHHHHEECCCHHHHHHCCCCCHHHCCCCCCEEEEEEECHHHEEEECCC
DGDSADYLAQARKLLPELSTPLELALGYSRIASIELTRGRPDIAEDLLNIALNTFIQQQN
CCCHHHHHHHHHHHHHHCCCCHHHHHCHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHH
QLYAMRVQGLLAQVEFAKNNHPAALKLMSQAIATAQQLQLYSEQAKYQLQLARFHESQGQ
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
FEKAFQTLDKSLQATVQAHRLINQTRTQQLNTRLGQRSLNADFELNPLSSFPGQSNLSWV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHH
YNLMLVMISLLLALVVWQMTRQFSSRPAEDNVPQSPVQWLEQAMLHAKRGGHPLSVLLLG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
VKNLDTQEIKNLTAALKLRLRETDSLYLLNDNEILILLPYTSNQGADLVVQQLSPALVPW
CCCCCHHHHHHHHHHHHHHEECCCCEEEECCCCEEEEEECCCCCCHHHHHHHCCCCCCCC
QDRKILLGQASMHQFDTSETLLKRATTRGMTRSTLMTNPH
CCCEEEEECCHHHHCCCHHHHHHHHHHCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA