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The map label for this gene is ccmC [H]

Identifier: 119773384

GI number: 119773384

Start: 267296

End: 268042

Strand: Reverse

Name: ccmC [H]

Synonym: Sama_0243

Alternate gene names: 119773384

Gene position: 268042-267296 (Counterclockwise)

Preceding gene: 119773385

Following gene: 119773383

Centisome position: 6.22

GC content: 53.82

Gene sequence:

>747_bases
ATGTGGAAGTGGTTACATCCTTACGCCGATCCCGAGCGTGCTTACAAGTTATCAGACAAACTCTTACCCTGGTTTGCCTT
CCTGGCGTTAGCCTTTATCGCCACTGGCACCACCTGGGGATTGCTGTTTGCGCCGACAGACTATCAACAGGGTGACAGCT
ATCGCATCATCTTTATTCACGTGCCAGCGGCATCCATGTCGATGGCAGCGTATATGGGGATGGCCACCGCCGCCTTTATT
GGTCTGGTATGGCAAATTAAAGCAGCTGATTGGACCGCCGCAGCCATCGCGCCAATCGGTGCTGTGGTCACCTTTATCGC
CCTCTTCACCGGCGCAACCTGGGGCAAGCCGATGTGGGGCACATGGTGGGTATGGGATGCACGCCTGACTTCTGAGTTGG
TGCTGCTGTTCCTGTATTTGGGCGTGATTGCGCTTTATGCATCTTTCGAAGACAAGGTGCTGGCCGCCCGGGCCGCTGGT
ATTCTGGCGATTGTGGGTGTGATTAACATCCCCATCATCAAGTATTCAGTGGAATGGTGGAGCTCACTGCATCAGCCATC
CACGATTCGAATCACCGAAAAATCCACCATGTCCAGCGACATGCTGTACCCTTTGCTCATTAATATTGTGGGCTTTGGCT
TGATGATCGGTGCTTTGACCCTGGTTCGATTCAAGGCCGAGATCCTGGCACGCAATGCCATGCGTCCCTGGGTGCGCGAG
ATGGCCTTGGCTCAAGGAGTTAAATAA

Upstream 100 bases:

>100_bases
TACGATGGCCAGCTCGCTATAATAGGTGCCATGCTGGTTGGGTCTTTAACACTGGCGCCCTTTGCCGTTGGCGCCTCTTT
AAGAGTGAGTACTAACTAAT

Downstream 100 bases:

>100_bases
TGCAGTTTGAATCCTTTACAGACTTTATCAACATGGGAGGCTACGCCTTCTATGTCTGGCTGGCTTATGGCGTTACTGCT
ACCAGCCTCGCGACCCTCAT

Product: heme exporter protein CcmC

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MWKWLHPYADPERAYKLSDKLLPWFAFLALAFIATGTTWGLLFAPTDYQQGDSYRIIFIHVPAASMSMAAYMGMATAAFI
GLVWQIKAADWTAAAIAPIGAVVTFIALFTGATWGKPMWGTWWVWDARLTSELVLLFLYLGVIALYASFEDKVLAARAAG
ILAIVGVINIPIIKYSVEWWSSLHQPSTIRITEKSTMSSDMLYPLLINIVGFGLMIGALTLVRFKAEILARNAMRPWVRE
MALAQGVK

Sequences:

>Translated_248_residues
MWKWLHPYADPERAYKLSDKLLPWFAFLALAFIATGTTWGLLFAPTDYQQGDSYRIIFIHVPAASMSMAAYMGMATAAFI
GLVWQIKAADWTAAAIAPIGAVVTFIALFTGATWGKPMWGTWWVWDARLTSELVLLFLYLGVIALYASFEDKVLAARAAG
ILAIVGVINIPIIKYSVEWWSSLHQPSTIRITEKSTMSSDMLYPLLINIVGFGLMIGALTLVRFKAEILARNAMRPWVRE
MALAQGVK
>Mature_248_residues
MWKWLHPYADPERAYKLSDKLLPWFAFLALAFIATGTTWGLLFAPTDYQQGDSYRIIFIHVPAASMSMAAYMGMATAAFI
GLVWQIKAADWTAAAIAPIGAVVTFIALFTGATWGKPMWGTWWVWDARLTSELVLLFLYLGVIALYASFEDKVLAARAAG
ILAIVGVINIPIIKYSVEWWSSLHQPSTIRITEKSTMSSDMLYPLLINIVGFGLMIGALTLVRFKAEILARNAMRPWVRE
MALAQGVK

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=248, Percent_Identity=57.6612903225806, Blast_Score=280, Evalue=8e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 27614; Mature: 27614

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKWLHPYADPERAYKLSDKLLPWFAFLALAFIATGTTWGLLFAPTDYQQGDSYRIIFIH
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEEE
VPAASMSMAAYMGMATAAFIGLVWQIKAADWTAAAIAPIGAVVTFIALFTGATWGKPMWG
ECCHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TWWVWDARLTSELVLLFLYLGVIALYASFEDKVLAARAAGILAIVGVINIPIIKYSVEWW
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHH
SSLHQPSTIRITEKSTMSSDMLYPLLINIVGFGLMIGALTLVRFKAEILARNAMRPWVRE
HHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MALAQGVK
HHHHCCCC
>Mature Secondary Structure
MWKWLHPYADPERAYKLSDKLLPWFAFLALAFIATGTTWGLLFAPTDYQQGDSYRIIFIH
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEEE
VPAASMSMAAYMGMATAAFIGLVWQIKAADWTAAAIAPIGAVVTFIALFTGATWGKPMWG
ECCHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TWWVWDARLTSELVLLFLYLGVIALYASFEDKVLAARAAGILAIVGVINIPIIKYSVEWW
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHH
SSLHQPSTIRITEKSTMSSDMLYPLLINIVGFGLMIGALTLVRFKAEILARNAMRPWVRE
HHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MALAQGVK
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]