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The map label for this gene is yrfG [H]

Identifier: 119773323

GI number: 119773323

Start: 210514

End: 211221

Strand: Reverse

Name: yrfG [H]

Synonym: Sama_0182

Alternate gene names: 119773323

Gene position: 211221-210514 (Counterclockwise)

Preceding gene: 119773330

Following gene: 119773322

Centisome position: 4.91

GC content: 53.95

Gene sequence:

>708_bases
ATGATGGGGTACAATCTTACTACCCCATTTTTAATCTACCAATGGAATTTTCCAATGTTTCCCTGGGACCAAATTGACAC
AGTACTGCTCGACATGGATGGCACCCTGCTGGACCTGCACTTTGATAACCACTTTTGGTTGTCACTGGTTCCCGGCACGC
TGAGCCGAATGCATGGCATCAGCGCCGAGGCCGCCACCTCCCATGTCAGAGCGGCATACGACAAGGTGGCGGGCACACTG
GAATGGTACTGCCTCGATTATTGGGAACGGGAACTCGGTTTGGATATCATGGCGCTGCACCGAACCCTGGTTGACAGAAT
ACAGCTCAGGCAGGACAGCATGCCCTTTTTGACGGCTCTCGCCGATGCCGGAAAACGCCGCATCTTGCTCACCAATGCCC
ACCCGAACAGCCTCGCTCTGAAGCTCGAACATACCGAACTGGCTTCAGGTTTGGATGAGATGCTCTCGAGCCATCAGACC
GGTCATCCTAAAGAGTCACCGTTATTCTGGCAGGCGGTATTTGCCCGCTTCGAACTCAACCCCAGGCGCTGTCTCTTTAT
CGACGACAGTGAGGCGATTCTGCTGGCAGCAAAGCATGCCGGTGTCGGGTTTCAGCTTGGGATCAGCAATCCCGACAGCC
AACAACCCAACAAAGTGTTCCATGACTTCCCAGCCATCCATGATTACCGGCTTCTGCTCAACGAGTAA

Upstream 100 bases:

>100_bases
CTGAAATAAACGGCTCTTCGCCACCACCTCAGTGTGCAGTATTTCCGGCTTTTGGCGCCGCTCTCCCATGCTCGCCCCTG
ACTCTTGAGTTTCATAAATC

Downstream 100 bases:

>100_bases
CCCAACCTCCCGGTTTGTGAAAAACAAGAGTTTGCTGTAACTTCGGGGTTTCATAAAAAACGATAAGGACATCGAATGAA
AACCCTGATTGCAAGCCTTG

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MMGYNLTTPFLIYQWNFPMFPWDQIDTVLLDMDGTLLDLHFDNHFWLSLVPGTLSRMHGISAEAATSHVRAAYDKVAGTL
EWYCLDYWERELGLDIMALHRTLVDRIQLRQDSMPFLTALADAGKRRILLTNAHPNSLALKLEHTELASGLDEMLSSHQT
GHPKESPLFWQAVFARFELNPRRCLFIDDSEAILLAAKHAGVGFQLGISNPDSQQPNKVFHDFPAIHDYRLLLNE

Sequences:

>Translated_235_residues
MMGYNLTTPFLIYQWNFPMFPWDQIDTVLLDMDGTLLDLHFDNHFWLSLVPGTLSRMHGISAEAATSHVRAAYDKVAGTL
EWYCLDYWERELGLDIMALHRTLVDRIQLRQDSMPFLTALADAGKRRILLTNAHPNSLALKLEHTELASGLDEMLSSHQT
GHPKESPLFWQAVFARFELNPRRCLFIDDSEAILLAAKHAGVGFQLGISNPDSQQPNKVFHDFPAIHDYRLLLNE
>Mature_235_residues
MMGYNLTTPFLIYQWNFPMFPWDQIDTVLLDMDGTLLDLHFDNHFWLSLVPGTLSRMHGISAEAATSHVRAAYDKVAGTL
EWYCLDYWERELGLDIMALHRTLVDRIQLRQDSMPFLTALADAGKRRILLTNAHPNSLALKLEHTELASGLDEMLSSHQT
GHPKESPLFWQAVFARFELNPRRCLFIDDSEAILLAAKHAGVGFQLGISNPDSQQPNKVFHDFPAIHDYRLLLNE

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082259, Length=212, Percent_Identity=52.3584905660377, Blast_Score=222, Evalue=2e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 26860; Mature: 26860

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGYNLTTPFLIYQWNFPMFPWDQIDTVLLDMDGTLLDLHFDNHFWLSLVPGTLSRMHGI
CCCCCCCCCEEEEEECCCCCCCHHHCEEEEECCCEEEEEEECCEEEEEECCHHHHHHCCC
SAEAATSHVRAAYDKVAGTLEWYCLDYWERELGLDIMALHRTLVDRIQLRQDSMPFLTAL
CHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHH
ADAGKRRILLTNAHPNSLALKLEHTELASGLDEMLSSHQTGHPKESPLFWQAVFARFELN
HHCCCCEEEEEECCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC
PRRCLFIDDSEAILLAAKHAGVGFQLGISNPDSQQPNKVFHDFPAIHDYRLLLNE
CCEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCHHHHHCCCCEEEEEEECC
>Mature Secondary Structure
MMGYNLTTPFLIYQWNFPMFPWDQIDTVLLDMDGTLLDLHFDNHFWLSLVPGTLSRMHGI
CCCCCCCCCEEEEEECCCCCCCHHHCEEEEECCCEEEEEEECCEEEEEECCHHHHHHCCC
SAEAATSHVRAAYDKVAGTLEWYCLDYWERELGLDIMALHRTLVDRIQLRQDSMPFLTAL
CHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHH
ADAGKRRILLTNAHPNSLALKLEHTELASGLDEMLSSHQTGHPKESPLFWQAVFARFELN
HHCCCCEEEEEECCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC
PRRCLFIDDSEAILLAAKHAGVGFQLGISNPDSQQPNKVFHDFPAIHDYRLLLNE
CCEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCHHHHHCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]