The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773301

Identifier: 119773301

GI number: 119773301

Start: 187894

End: 188409

Strand: Direct

Name: 119773301

Synonym: Sama_0159

Alternate gene names: NA

Gene position: 187894-188409 (Clockwise)

Preceding gene: 119773300

Following gene: 119773302

Centisome position: 4.36

GC content: 55.62

Gene sequence:

>516_bases
ATGAAACAACCCATTCCGTTTGTGGCCGCCGACATCTCGGCATTGGCCAAGTCCCTTCGCAAGCAATTGATGGCCTGCGA
GCAATTCCCGACCCATGTAGAAATGCTGAACCTGCTTGCCAAGGCCAGCGGGTATCAAAACTTTCAGCAGTTTAAGGCGC
AGCAGGTGCCAGTGGGCGCGGATGCGTCAGGTGTTGACTCTTTGGCCGTGGATATTCCGGCCAAGCTGAAACCCTTTATG
GACCAAGATTATGTGCTCAGGCAATGGCCCGGCCGTTTTGCGTTGCAGCAACAAAGTCTGTGGTTTTTCTGGTGCCGTTT
CCGCTATGGGGTAGAGTACAGCGAGGCCGAGGTGAATGCCTTGCTCAAACCCTTTATCGGATTTGGGGATCATCCCCTTA
TCCGGCGGGAACTGGTCAACAAGGCCCTGCTGGGACGCACCGACGATGGTGGTCGTTATTGGCGCCAAAGCGCCATTCCA
CCTGCCGGATTTGAGCGCTTGGCCGAAGTCTGGTGA

Upstream 100 bases:

>100_bases
CTGCCTTACACCTGAATCCGGTACCGTACATTCGCGTGCCCCGTTGGAAGTCGGCGATCACTGACACCCCAGGGCGGGCG
CGCCTGTGTGAGGTACAGTC

Downstream 100 bases:

>100_bases
GGTAAGTTAAGCCCCGAAGTGTGTTCGGGGCTTTTTTGTTGCTGCGCCAGCAAGTAGCATGATTTTACAATCAATGATGC
CGTTTCGGTGAGACAGGACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKQPIPFVAADISALAKSLRKQLMACEQFPTHVEMLNLLAKASGYQNFQQFKAQQVPVGADASGVDSLAVDIPAKLKPFM
DQDYVLRQWPGRFALQQQSLWFFWCRFRYGVEYSEAEVNALLKPFIGFGDHPLIRRELVNKALLGRTDDGGRYWRQSAIP
PAGFERLAEVW

Sequences:

>Translated_171_residues
MKQPIPFVAADISALAKSLRKQLMACEQFPTHVEMLNLLAKASGYQNFQQFKAQQVPVGADASGVDSLAVDIPAKLKPFM
DQDYVLRQWPGRFALQQQSLWFFWCRFRYGVEYSEAEVNALLKPFIGFGDHPLIRRELVNKALLGRTDDGGRYWRQSAIP
PAGFERLAEVW
>Mature_171_residues
MKQPIPFVAADISALAKSLRKQLMACEQFPTHVEMLNLLAKASGYQNFQQFKAQQVPVGADASGVDSLAVDIPAKLKPFM
DQDYVLRQWPGRFALQQQSLWFFWCRFRYGVEYSEAEVNALLKPFIGFGDHPLIRRELVNKALLGRTDDGGRYWRQSAIP
PAGFERLAEVW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19479; Mature: 19479

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQPIPFVAADISALAKSLRKQLMACEQFPTHVEMLNLLAKASGYQNFQQFKAQQVPVGA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
DASGVDSLAVDIPAKLKPFMDQDYVLRQWPGRFALQQQSLWFFWCRFRYGVEYSEAEVNA
CCCCCCHHEECCCHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LLKPFIGFGDHPLIRRELVNKALLGRTDDGGRYWRQSAIPPAGFERLAEVW
HHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure
MKQPIPFVAADISALAKSLRKQLMACEQFPTHVEMLNLLAKASGYQNFQQFKAQQVPVGA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
DASGVDSLAVDIPAKLKPFMDQDYVLRQWPGRFALQQQSLWFFWCRFRYGVEYSEAEVNA
CCCCCCHHEECCCHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LLKPFIGFGDHPLIRRELVNKALLGRTDDGGRYWRQSAIPPAGFERLAEVW
HHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA