The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is basS [C]

Identifier: 119773289

GI number: 119773289

Start: 168917

End: 170131

Strand: Direct

Name: basS [C]

Synonym: Sama_0147

Alternate gene names: 119773289

Gene position: 168917-170131 (Clockwise)

Preceding gene: 119773288

Following gene: 119773290

Centisome position: 3.92

GC content: 55.06

Gene sequence:

>1215_bases
GTGAATCCCGGTATTGAGCAGAAGATCAATCGCAGTTTTATGATTGGCGCAGCGGTGCTCCTTGGCTGTTACGCGCTCTT
GATTGAATTCGGCATTCATGCGCTCGAAAACCACCTCAGTGGCGCTTTTCTGCAAACCGTGGCTCCCCAGCTGGTGGATG
CCTACGAACATGGAGCTCTGTCATCCCCGGATGAGGCTCAAATTCAGGTGTTGCCATCGTTACCGGCAGAGCTGGCTGCC
CAGCTGCCGTCCCGGGAACCCGGACTCTACAATCTACGTCACCCCAATATTGATTTTGAATTCAACGTCTTGGTTGTTGA
CCGTGACGGCAGACTCTTGTATCTGGTGCAGCGCCCCGATCTGTTTGAGCTGGAAGGCTGGCAGGACTTTTTGCTGGATA
CCTTGCTGATAGGTGGCGGCGCCAGCTTACTGCTGTTTTCAAGCCTGTATATCCGCAGCACGGCGAGGCGTATCGGTAAG
CCCTTCGATTCCCTTGCCCGTCACTTGGACGCCGATGCCCGGGCGCTGGAACCCATCACGCTGAAAGATGACACCCGGGA
ATATGTGGCCCTGGTGAATGCCCTCAATCAAAGCCACGCCCGGGTGAAGGAAGCGTTGGCCAGAGAAAAGAAGTTTACCC
ATTACGTGAGCCATGAGTTTCGCACACCCTTGACCGTCCTTAAGCTGGCACTGAGCAAAATGGGAGACGCAGAGGCGCCA
GCCATGCAGCGGGCGATGCGTGCTGTGTGGGAAATGGAAAATCTCACTGGTGTCCTTCTGCTGCTTGCGCGCCGAACCGA
ACAGGATGATGGTCATTGTCTGCTTGATGAGGCCTTGCTGGCCCCTTTACTTGAGCGGCTGGCTATCCGCAGGAAGAGCA
GCGCCGCAGAGTTTTCCATGCATGTTAGCCCTTGCCAGCTGCCGGCACACCCGCTTTTGCTCGGTTGCCTGATTGAAAAC
CTGCTGGCCAATGCCTTTATCCACAGTGTGGGCGCCCGTGTGTATTTACGCACCGATGCCAGTGGTATTCAAATCTCCAA
CCTCGGCGGGGAGGCCATAGAGCATGGTGAGAGCCACGGTATCGGTCTCATTCTGGTGGAAGATATTTGCAAGCGTTATG
GCTGGCACTTTTCCATGGTTGTGGCACCCGAGGGTGTGGTAGCCCAGGTTGTGTTCAACCAAAGTATGATGAATGAGGAC
ACTTCATTGACATAA

Upstream 100 bases:

>100_bases
ATATTCTGCGCAAACACATTTACCTGCTCAGGCAAAAACTCGACAAACCCTTTCCCGAGAAACGCATCCATACCCAGGCC
CGCAAAGGATATCGTTTGTT

Downstream 100 bases:

>100_bases
GTGGCGATATGATGCTCCCCAAAAGATTACAATAAAACAACATTGGGGCAGCTGATGAAGCTGGGTAACACTGATATTTC
CGGGGCGCAGGCCGTTTTTT

Product: signal transduction histidine kinase-like protein

Products: NA

Alternate protein names: Sensor Histidine Kinase; Periplasmic Sensor Signal Transduction Histidine Kinase; Two-Component Sensor; Signal Transduction Histidine Kinase-Like Protein; Histidine Kinase A Domain Protein; Signal Transduction Histidine Kinase

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MNPGIEQKINRSFMIGAAVLLGCYALLIEFGIHALENHLSGAFLQTVAPQLVDAYEHGALSSPDEAQIQVLPSLPAELAA
QLPSREPGLYNLRHPNIDFEFNVLVVDRDGRLLYLVQRPDLFELEGWQDFLLDTLLIGGGASLLLFSSLYIRSTARRIGK
PFDSLARHLDADARALEPITLKDDTREYVALVNALNQSHARVKEALAREKKFTHYVSHEFRTPLTVLKLALSKMGDAEAP
AMQRAMRAVWEMENLTGVLLLLARRTEQDDGHCLLDEALLAPLLERLAIRRKSSAAEFSMHVSPCQLPAHPLLLGCLIEN
LLANAFIHSVGARVYLRTDASGIQISNLGGEAIEHGESHGIGLILVEDICKRYGWHFSMVVAPEGVVAQVVFNQSMMNED
TSLT

Sequences:

>Translated_404_residues
MNPGIEQKINRSFMIGAAVLLGCYALLIEFGIHALENHLSGAFLQTVAPQLVDAYEHGALSSPDEAQIQVLPSLPAELAA
QLPSREPGLYNLRHPNIDFEFNVLVVDRDGRLLYLVQRPDLFELEGWQDFLLDTLLIGGGASLLLFSSLYIRSTARRIGK
PFDSLARHLDADARALEPITLKDDTREYVALVNALNQSHARVKEALAREKKFTHYVSHEFRTPLTVLKLALSKMGDAEAP
AMQRAMRAVWEMENLTGVLLLLARRTEQDDGHCLLDEALLAPLLERLAIRRKSSAAEFSMHVSPCQLPAHPLLLGCLIEN
LLANAFIHSVGARVYLRTDASGIQISNLGGEAIEHGESHGIGLILVEDICKRYGWHFSMVVAPEGVVAQVVFNQSMMNED
TSLT
>Mature_404_residues
MNPGIEQKINRSFMIGAAVLLGCYALLIEFGIHALENHLSGAFLQTVAPQLVDAYEHGALSSPDEAQIQVLPSLPAELAA
QLPSREPGLYNLRHPNIDFEFNVLVVDRDGRLLYLVQRPDLFELEGWQDFLLDTLLIGGGASLLLFSSLYIRSTARRIGK
PFDSLARHLDADARALEPITLKDDTREYVALVNALNQSHARVKEALAREKKFTHYVSHEFRTPLTVLKLALSKMGDAEAP
AMQRAMRAVWEMENLTGVLLLLARRTEQDDGHCLLDEALLAPLLERLAIRRKSSAAEFSMHVSPCQLPAHPLLLGCLIEN
LLANAFIHSVGARVYLRTDASGIQISNLGGEAIEHGESHGIGLILVEDICKRYGWHFSMVVAPEGVVAQVVFNQSMMNED
TSLT

Specific function: Member Of The Two-Component Regulatory System Bass/Basr. May Activate Basr By Phosphorylation. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.3.- [C]

Molecular weight: Translated: 44653; Mature: 44653

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPGIEQKINRSFMIGAAVLLGCYALLIEFGIHALENHLSGAFLQTVAPQLVDAYEHGAL
CCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SSPDEAQIQVLPSLPAELAAQLPSREPGLYNLRHPNIDFEFNVLVVDRDGRLLYLVQRPD
CCCCCCCEEECCCCHHHHHHHCCCCCCCCEECCCCCCCEEEEEEEEECCCCEEEEEECCC
LFELEGWQDFLLDTLLIGGGASLLLFSSLYIRSTARRIGKPFDSLARHLDADARALEPIT
CEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHCCCEE
LKDDTREYVALVNALNQSHARVKEALAREKKFTHYVSHEFRTPLTVLKLALSKMGDAEAP
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCH
AMQRAMRAVWEMENLTGVLLLLARRTEQDDGHCLLDEALLAPLLERLAIRRKSSAAEFSM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHEEE
HVSPCQLPAHPLLLGCLIENLLANAFIHSVGARVYLRTDASGIQISNLGGEAIEHGESHG
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEECCCCHHHHCCCCCC
IGLILVEDICKRYGWHFSMVVAPEGVVAQVVFNQSMMNEDTSLT
EEEEEHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNPGIEQKINRSFMIGAAVLLGCYALLIEFGIHALENHLSGAFLQTVAPQLVDAYEHGAL
CCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SSPDEAQIQVLPSLPAELAAQLPSREPGLYNLRHPNIDFEFNVLVVDRDGRLLYLVQRPD
CCCCCCCEEECCCCHHHHHHHCCCCCCCCEECCCCCCCEEEEEEEEECCCCEEEEEECCC
LFELEGWQDFLLDTLLIGGGASLLLFSSLYIRSTARRIGKPFDSLARHLDADARALEPIT
CEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHCCCEE
LKDDTREYVALVNALNQSHARVKEALAREKKFTHYVSHEFRTPLTVLKLALSKMGDAEAP
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCH
AMQRAMRAVWEMENLTGVLLLLARRTEQDDGHCLLDEALLAPLLERLAIRRKSSAAEFSM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHEEE
HVSPCQLPAHPLLLGCLIENLLANAFIHSVGARVYLRTDASGIQISNLGGEAIEHGESHG
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEECCCCHHHHCCCCCC
IGLILVEDICKRYGWHFSMVVAPEGVVAQVVFNQSMMNEDTSLT
EEEEEHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA