Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773290

Identifier: 119773290

GI number: 119773290

Start: 170186

End: 170986

Strand: Direct

Name: 119773290

Synonym: Sama_0148

Alternate gene names: NA

Gene position: 170186-170986 (Clockwise)

Preceding gene: 119773289

Following gene: 119773291

Centisome position: 3.95

GC content: 55.56

Gene sequence:

>801_bases
ATGAAGCTGGGTAACACTGATATTTCCGGGGCGCAGGCCGTTTTTTTGGCCTTGGGTTCGTTGGCCATTTTTTTCAGTCA
GGTGCCTTCGGCCAGCCAGCAGTTGTTTCTCTTTATTAATCAGGCGGGAAGGCTTGTGCCCGACACCCCGTTGGCCCTTG
TCACAGATTGGGGGAATGGCATTGCTGCGGCCTGTATCTGGTTGACTATCCTATGTTTTCGCCCATCCATTTTCTGGAAA
TCTCTTACCGCTATCGCGGTTGCGGCCTTGTTGATCAATGCCCTGAAGCAAGGCTTTGATGTGATGCGCCCTGCCGCAGT
ACTGGAGCATATCCGCATTGTCGGCGCGATGCGCCTCAACCACAGTTTCCCATCGGCCCACACGGGCACAGTGTTTGTCA
TTGCGGGCATGGCCTGGACTCTCTGCCGTCGCACTGATATCAAGACACTGATTTTATTGTTAGCCCTGATGGTAGGCCTA
AGCCGCATCACCAATGGCGCGCATTGGCCACTGGATGTGGTGATGGGCGCCTGGCTTGGATGGGGTTCTGCCCGACTTGC
GGCCCATTGGGTTCCCGAGTGCCAGCTGAGTTCAAAGCATATACTGCTGATAATGAGCATTTTTTACGGCATTGTATTGG
TCTCGGCTCTGCAAGCCCGCGTACCATTCCCGAACCTGCCGCTGGTGGGCATCCAGCTGAACCTGCTGTTGCTATTGCCC
CTGGCTGGGCTTGCACGACTCTATCGGCAAATGCGTGCCCAACAGTCCGCCAGCGAGAGCAAGGTTTCCCTCGCCGGTTG
A

Upstream 100 bases:

>100_bases
TGTGTTCAACCAAAGTATGATGAATGAGGACACTTCATTGACATAAGTGGCGATATGATGCTCCCCAAAAGATTACAATA
AAACAACATTGGGGCAGCTG

Downstream 100 bases:

>100_bases
GCGTCTCCGGTTAAGCGCTGATAGAGTGCCTTACAATCAGTGTTGGTGGCTTTTTGTATTCACCGGTAATGATGTTTAAT
GGCTTTCGTGAGCGACTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Phosphoesterase PA-Phosphatase-Like Protein; PAP2 Family Protein; Glycosyltransferase

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MKLGNTDISGAQAVFLALGSLAIFFSQVPSASQQLFLFINQAGRLVPDTPLALVTDWGNGIAAACIWLTILCFRPSIFWK
SLTAIAVAALLINALKQGFDVMRPAAVLEHIRIVGAMRLNHSFPSAHTGTVFVIAGMAWTLCRRTDIKTLILLLALMVGL
SRITNGAHWPLDVVMGAWLGWGSARLAAHWVPECQLSSKHILLIMSIFYGIVLVSALQARVPFPNLPLVGIQLNLLLLLP
LAGLARLYRQMRAQQSASESKVSLAG

Sequences:

>Translated_266_residues
MKLGNTDISGAQAVFLALGSLAIFFSQVPSASQQLFLFINQAGRLVPDTPLALVTDWGNGIAAACIWLTILCFRPSIFWK
SLTAIAVAALLINALKQGFDVMRPAAVLEHIRIVGAMRLNHSFPSAHTGTVFVIAGMAWTLCRRTDIKTLILLLALMVGL
SRITNGAHWPLDVVMGAWLGWGSARLAAHWVPECQLSSKHILLIMSIFYGIVLVSALQARVPFPNLPLVGIQLNLLLLLP
LAGLARLYRQMRAQQSASESKVSLAG
>Mature_266_residues
MKLGNTDISGAQAVFLALGSLAIFFSQVPSASQQLFLFINQAGRLVPDTPLALVTDWGNGIAAACIWLTILCFRPSIFWK
SLTAIAVAALLINALKQGFDVMRPAAVLEHIRIVGAMRLNHSFPSAHTGTVFVIAGMAWTLCRRTDIKTLILLLALMVGL
SRITNGAHWPLDVVMGAWLGWGSARLAAHWVPECQLSSKHILLIMSIFYGIVLVSALQARVPFPNLPLVGIQLNLLLLLP
LAGLARLYRQMRAQQSASESKVSLAG

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28772; Mature: 28772

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGNTDISGAQAVFLALGSLAIFFSQVPSASQQLFLFINQAGRLVPDTPLALVTDWGNG
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCCCCCCCEEEEEECCCH
IAAACIWLTILCFRPSIFWKSLTAIAVAALLINALKQGFDVMRPAAVLEHIRIVGAMRLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HSFPSAHTGTVFVIAGMAWTLCRRTDIKTLILLLALMVGLSRITNGAHWPLDVVMGAWLG
CCCCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
WGSARLAAHWVPECQLSSKHILLIMSIFYGIVLVSALQARVPFPNLPLVGIQLNLLLLLP
CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHH
LAGLARLYRQMRAQQSASESKVSLAG
HHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKLGNTDISGAQAVFLALGSLAIFFSQVPSASQQLFLFINQAGRLVPDTPLALVTDWGNG
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCCCCCCCEEEEEECCCH
IAAACIWLTILCFRPSIFWKSLTAIAVAALLINALKQGFDVMRPAAVLEHIRIVGAMRLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HSFPSAHTGTVFVIAGMAWTLCRRTDIKTLILLLALMVGLSRITNGAHWPLDVVMGAWLG
CCCCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
WGSARLAAHWVPECQLSSKHILLIMSIFYGIVLVSALQARVPFPNLPLVGIQLNLLLLLP
CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHH
LAGLARLYRQMRAQQSASESKVSLAG
HHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA