Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is coaD [H]

Identifier: 119773252

GI number: 119773252

Start: 123549

End: 124118

Strand: Direct

Name: coaD [H]

Synonym: Sama_0110

Alternate gene names: 119773252

Gene position: 123549-124118 (Clockwise)

Preceding gene: 119773246

Following gene: 119773253

Centisome position: 2.87

GC content: 51.93

Gene sequence:

>570_bases
ATGCACCTGAGGCGTACTTGTGGCAGAATGGGCAAACTTTCTTTGGGCTATCAACCCTTAACTCGATACGACACAGGTCT
GTATATGCATACAAGAGCCATCTATCCCGGTACTTTCGATCCTGTCACCAATGGGCATGCGGATCTGATAGAGCGGGCCG
CCAACCTGTTTAAGCATGTGGTAATAGGCGTGGCAGCCAGCCCGTCAAAACAGCCGAAGTTTTCATTGGAAAAACGGGTA
GAGCTGCTGAAAAAGGTCACAGCTCATCTGGATAACGTGGAAGTGGTCGGATTTACCGGCTTGCTGGTGGACTTTGCCAA
AGACCAGCAGGCCAGTGTACTGGTGCGGGGCCTGCGAGCCGTGTCGGACTTTGAGTATGAATTCCAACTGGCCAACATGA
ACCGTCGCTTAAGCCCGGATCTGGAAAGCGTGTTCCTGACGCCCGCAGAAGAAAACTCCTTTATCTCATCAACTCTGGTG
AAAGAGGTGGCGCTTCATGGGGGCGATGTGAGCCAATTTGTACATCCTGACGTTGCCGCAGAATTATTGGCACTGCCGCG
TAAGAAGTGA

Upstream 100 bases:

>100_bases
TGGTTTTGTTTTTGTGTGACTGGTGAATGGTGTGTTACGTATTTGGTCCGGAGTTTTGAGGTTACCGGATGCAGGCTTGT
AATTTGCCTGTTGTGAGGCC

Downstream 100 bases:

>100_bases
ATGATTAAAAGGGATTTTATGAAGTACATGTCGTTATCTGCGCTGAGCTTGGCGCTGCTGTCTGCGTCAACTCTGGCGGC
ACCTTGGGTCGATGCATCCG

Product: pantetheine-phosphate adenylyltransferase

Products: NA

Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT [H]

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MHLRRTCGRMGKLSLGYQPLTRYDTGLYMHTRAIYPGTFDPVTNGHADLIERAANLFKHVVIGVAASPSKQPKFSLEKRV
ELLKKVTAHLDNVEVVGFTGLLVDFAKDQQASVLVRGLRAVSDFEYEFQLANMNRRLSPDLESVFLTPAEENSFISSTLV
KEVALHGGDVSQFVHPDVAAELLALPRKK

Sequences:

>Translated_189_residues
MHLRRTCGRMGKLSLGYQPLTRYDTGLYMHTRAIYPGTFDPVTNGHADLIERAANLFKHVVIGVAASPSKQPKFSLEKRV
ELLKKVTAHLDNVEVVGFTGLLVDFAKDQQASVLVRGLRAVSDFEYEFQLANMNRRLSPDLESVFLTPAEENSFISSTLV
KEVALHGGDVSQFVHPDVAAELLALPRKK
>Mature_189_residues
MHLRRTCGRMGKLSLGYQPLTRYDTGLYMHTRAIYPGTFDPVTNGHADLIERAANLFKHVVIGVAASPSKQPKFSLEKRV
ELLKKVTAHLDNVEVVGFTGLLVDFAKDQQASVLVRGLRAVSDFEYEFQLANMNRRLSPDLESVFLTPAEENSFISSTLV
KEVALHGGDVSQFVHPDVAAELLALPRKK

Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate [H]

COG id: COG0669

COG function: function code H; Phosphopantetheine adenylyltransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial CoaD family [H]

Homologues:

Organism=Escherichia coli, GI1790065, Length=156, Percent_Identity=62.8205128205128, Blast_Score=214, Evalue=4e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004821
- InterPro:   IPR004820
- InterPro:   IPR001980
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01467 CTP_transf_2 [H]

EC number: =2.7.7.3 [H]

Molecular weight: Translated: 21006; Mature: 21006

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLRRTCGRMGKLSLGYQPLTRYDTGLYMHTRAIYPGTFDPVTNGHADLIERAANLFKHV
CCCHHHHCCCCCCCCCCCCHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
VIGVAASPSKQPKFSLEKRVELLKKVTAHLDNVEVVGFTGLLVDFAKDQQASVLVRGLRA
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHH
VSDFEYEFQLANMNRRLSPDLESVFLTPAEENSFISSTLVKEVALHGGDVSQFVHPDVAA
HHCCCEEEEEECCCCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHCCCCHHHHCCHHHHH
ELLALPRKK
HHHHCCCCC
>Mature Secondary Structure
MHLRRTCGRMGKLSLGYQPLTRYDTGLYMHTRAIYPGTFDPVTNGHADLIERAANLFKHV
CCCHHHHCCCCCCCCCCCCHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
VIGVAASPSKQPKFSLEKRVELLKKVTAHLDNVEVVGFTGLLVDFAKDQQASVLVRGLRA
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHH
VSDFEYEFQLANMNRRLSPDLESVFLTPAEENSFISSTLVKEVALHGGDVSQFVHPDVAA
HHCCCEEEEEECCCCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHCCCCHHHHCCHHHHH
ELLALPRKK
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA