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The map label for this gene is rfaB [C]

Identifier: 119773246

GI number: 119773246

Start: 117247

End: 118344

Strand: Direct

Name: rfaB [C]

Synonym: Sama_0104

Alternate gene names: 119773246

Gene position: 117247-118344 (Clockwise)

Preceding gene: 119773245

Following gene: 119773252

Centisome position: 2.72

GC content: 54.01

Gene sequence:

>1098_bases
ATGACAGGACGCAGAATTGCCATTGCCATCGACAGTTTGGCCGGTGGCGGCGCAGAAAAGGTGATGTTGACCCTGGCGTC
CACCCTGGTGGAGCTGGGCCATGAGCCACATCTATTGGTGTTGCAGCAGGACTGCCACCATGAAATTCCCCCCGGCCTCC
AGGTGCACTTTTGCTTTGGTGGTGATGAGCGCAATATCGACGGCTTTTGGCGCACCCGAGGTTCGGTACAGAAGTTACAA
CAGTGGATAACAGGGCTTGAGGAGCGTTTCGGCAAGTTTGAACTGTTCCTGTCCAATCTGGACAAAACCAATCTGCTGAT
GACCCGCACCGGCGTGGCACCGCTTTATTGCGTGGTTCACAATTCCATTGAAGAAGAGCTGCAACGCCAGCGTAAGTTGG
GACCTTTTGCCTATCTGAGTATGTTGCGGGCGAAAAAATCACTCAATGGCCAGCACCTGATCACTGTATCCAAGGGCATT
GCCAATGAGATTGCCGAGGTGGGCAGGGTGCAGCCCGCCTCTGTGCAAACCATTTATAATCCGTTCGAACTGGAAAAAAT
TCAGCACCAGGCCAGTCAAACAGCCGACGCATTGCCCAAGGGGGATTACATCATCCATGTTGGGCGGTTTGCACGCCAAA
AACGCCATGATGTGCTCTTTGCGGCGTTGAAGCAGATGCGCAATCCCTTGCCGCTCGTGCTGCTTTGCAACAACAAGAAA
AAGGCTATCAAGTCGGCCCGCAAGTTTGGGGTTGAAGACAGGGTGATTATTCCCGGATTCCAAACCAATCCCTATCCCTG
GATAAAGGGTGCCAGGCTGCTGGCATTGAGTTCAGATTATGAAGGCTTGCCAACGGTGTTGATTGAATCGCTGGCAGTGG
GCACTCCGGTAGTCAGTACCGACTGTCGCCATGGTCCCAAAGAAATTCTCACCGGGGCGTTGCGACGATTTTTGGTCCCA
AGACGTGACCCTGCGGCTTTGGCGATGGCCATGGATGAAGCCCTGACCCACTATCCAGACTGCGACGATGCGGAAATTCT
GACTCAGGTCGGCGCTGCTGCAGTCGCAGGCAAGTACCTGAAACTGCTGACAGCCTGA

Upstream 100 bases:

>100_bases
AAACCACAGGGCCACTGCAGCAGGCACTGGCAGCCGAAGCCGATATGGACGGCCTGCAACTGACCATGAATAAAATTAAG
CATTTGCTGGAGGTTCAGCC

Downstream 100 bases:

>100_bases
AACGTTTGATTCGACACAGATATAATAAAAAATCCCGGTATGGCCGGGATTTTTTTCAGGCTTTTTTACCCTGAGTCAGA
CGGAATTTGAGGTAACTCAA

Product: glycosyl transferase, group 1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MTGRRIAIAIDSLAGGGAEKVMLTLASTLVELGHEPHLLVLQQDCHHEIPPGLQVHFCFGGDERNIDGFWRTRGSVQKLQ
QWITGLEERFGKFELFLSNLDKTNLLMTRTGVAPLYCVVHNSIEEELQRQRKLGPFAYLSMLRAKKSLNGQHLITVSKGI
ANEIAEVGRVQPASVQTIYNPFELEKIQHQASQTADALPKGDYIIHVGRFARQKRHDVLFAALKQMRNPLPLVLLCNNKK
KAIKSARKFGVEDRVIIPGFQTNPYPWIKGARLLALSSDYEGLPTVLIESLAVGTPVVSTDCRHGPKEILTGALRRFLVP
RRDPAALAMAMDEALTHYPDCDDAEILTQVGAAAVAGKYLKLLTA

Sequences:

>Translated_365_residues
MTGRRIAIAIDSLAGGGAEKVMLTLASTLVELGHEPHLLVLQQDCHHEIPPGLQVHFCFGGDERNIDGFWRTRGSVQKLQ
QWITGLEERFGKFELFLSNLDKTNLLMTRTGVAPLYCVVHNSIEEELQRQRKLGPFAYLSMLRAKKSLNGQHLITVSKGI
ANEIAEVGRVQPASVQTIYNPFELEKIQHQASQTADALPKGDYIIHVGRFARQKRHDVLFAALKQMRNPLPLVLLCNNKK
KAIKSARKFGVEDRVIIPGFQTNPYPWIKGARLLALSSDYEGLPTVLIESLAVGTPVVSTDCRHGPKEILTGALRRFLVP
RRDPAALAMAMDEALTHYPDCDDAEILTQVGAAAVAGKYLKLLTA
>Mature_364_residues
TGRRIAIAIDSLAGGGAEKVMLTLASTLVELGHEPHLLVLQQDCHHEIPPGLQVHFCFGGDERNIDGFWRTRGSVQKLQQ
WITGLEERFGKFELFLSNLDKTNLLMTRTGVAPLYCVVHNSIEEELQRQRKLGPFAYLSMLRAKKSLNGQHLITVSKGIA
NEIAEVGRVQPASVQTIYNPFELEKIQHQASQTADALPKGDYIIHVGRFARQKRHDVLFAALKQMRNPLPLVLLCNNKKK
AIKSARKFGVEDRVIIPGFQTNPYPWIKGARLLALSSDYEGLPTVLIESLAVGTPVVSTDCRHGPKEILTGALRRFLVPR
RDPAALAMAMDEALTHYPDCDDAEILTQVGAAAVAGKYLKLLTA

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI226510984, Length=192, Percent_Identity=27.6041666666667, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 40425; Mature: 40293

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGRRIAIAIDSLAGGGAEKVMLTLASTLVELGHEPHLLVLQQDCHHEIPPGLQVHFCFG
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEC
GDERNIDGFWRTRGSVQKLQQWITGLEERFGKFELFLSNLDKTNLLMTRTGVAPLYCVVH
CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
NSIEEELQRQRKLGPFAYLSMLRAKKSLNGQHLITVSKGIANEIAEVGRVQPASVQTIYN
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCCCHHHHHCC
PFELEKIQHQASQTADALPKGDYIIHVGRFARQKRHDVLFAALKQMRNPLPLVLLCNNKK
HHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHH
KAIKSARKFGVEDRVIIPGFQTNPYPWIKGARLLALSSDYEGLPTVLIESLAVGTPVVST
HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCC
DCRHGPKEILTGALRRFLVPRRDPAALAMAMDEALTHYPDCDDAEILTQVGAAAVAGKYL
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
KLLTA
HHHCC
>Mature Secondary Structure 
TGRRIAIAIDSLAGGGAEKVMLTLASTLVELGHEPHLLVLQQDCHHEIPPGLQVHFCFG
CCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEC
GDERNIDGFWRTRGSVQKLQQWITGLEERFGKFELFLSNLDKTNLLMTRTGVAPLYCVVH
CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
NSIEEELQRQRKLGPFAYLSMLRAKKSLNGQHLITVSKGIANEIAEVGRVQPASVQTIYN
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCCCHHHHHCC
PFELEKIQHQASQTADALPKGDYIIHVGRFARQKRHDVLFAALKQMRNPLPLVLLCNNKK
HHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHH
KAIKSARKFGVEDRVIIPGFQTNPYPWIKGARLLALSSDYEGLPTVLIESLAVGTPVVST
HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCC
DCRHGPKEILTGALRRFLVPRRDPAALAMAMDEALTHYPDCDDAEILTQVGAAAVAGKYL
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
KLLTA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]