The gene/protein map for NC_012660 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773248

Identifier: 119773248

GI number: 119773248

Start: 119428

End: 120150

Strand: Reverse

Name: 119773248

Synonym: Sama_0106

Alternate gene names: NA

Gene position: 120150-119428 (Counterclockwise)

Preceding gene: 119773249

Following gene: 119773247

Centisome position: 2.79

GC content: 54.08

Gene sequence:

>723_bases
ATGATAGTGATCCCCATGGCGGGGCTAAGCTCCCGCTTTTTCAACGCTGGCTACACCCAGCCCAAATACATGCTCGACGC
TGGCGGCATGCCACTGTTTGACCACGCCCTGCTCAGCTTCGCGGCCTATTTCGGCACTACGCCTTTTTTGTTTATTGTGC
GCGACCTGTATGACACAGCGGCCTTCGTCAAAACACGCTGCAAGGCACTGGGCATCAAAGACTTCAAGATTGTTGCCCTG
GAGCAGCCAACCCGTGGACAGGCTGAAACCGTGTACCTGGGACTGACGGATGTAGCAGACACCGAGCCACTGACAATTTT
CAATATAGATACCTTCAGACCCGGATTTACCCTGCCCCCCATAGCCGATACGGCCGATGGCTATCTGGAAGTATTCAAAG
GTGAAGGCAGCAACTGGTCCTATGCCAAACCCGCCGATGCCAAAAGCACCCGCGTCGTGCAGACAACCGAAAAGCAACCC
ATATCCGACCTCTGCAGCACAGGGCTTTATTATTTCCGTCAAACCGCCGATTTTCGCCTTGCCTACGAAACGGAAGCCGC
GCGGCCTGCAAGCGAGTGGCAAAAGCAGGAGCTTTATATAGCACCGCTTTACAACCACCTGATAGCCCGGGGTAAGAACA
TTCACTACCACCTTATCGATGCCAGTGACGTGATTTTCTGTGGGGTGCCAGAGGAATATCAGGCCCTGCTGGCCCAATAT
TGA

Upstream 100 bases:

>100_bases
TGCTGCCACTCCACAGTGACAGACCAGACCGGCAGCTTGGATTCATAGGTAACGCCTATCGACTCTATGACAGGCTGCTT
GCCTGCACAGGAAATCCATC

Downstream 100 bases:

>100_bases
TATCGCCGAGCCGGGCTACGGCACGGCTCAAGCTCGCTGGTTTTAAGCCTATGACAATCAAATTCAGTGATATTACTGTG
GTGGTACAGGGACCGGTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: DTDP-Glucose Pyrophosphorylase; Nucleotidyl Transferase; Phosphatase/Phosphohexomutase; Nucleoside-Diphosphate-Sugar Pyrophosphorylase; Dolichyl-Phosphate Mannose Synthase; Nucleotidyl Transferase Family; Nucleotidyltransferase; UTP-Glucose-1-Phosphate Uridylyltransferase

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MIVIPMAGLSSRFFNAGYTQPKYMLDAGGMPLFDHALLSFAAYFGTTPFLFIVRDLYDTAAFVKTRCKALGIKDFKIVAL
EQPTRGQAETVYLGLTDVADTEPLTIFNIDTFRPGFTLPPIADTADGYLEVFKGEGSNWSYAKPADAKSTRVVQTTEKQP
ISDLCSTGLYYFRQTADFRLAYETEAARPASEWQKQELYIAPLYNHLIARGKNIHYHLIDASDVIFCGVPEEYQALLAQY

Sequences:

>Translated_240_residues
MIVIPMAGLSSRFFNAGYTQPKYMLDAGGMPLFDHALLSFAAYFGTTPFLFIVRDLYDTAAFVKTRCKALGIKDFKIVAL
EQPTRGQAETVYLGLTDVADTEPLTIFNIDTFRPGFTLPPIADTADGYLEVFKGEGSNWSYAKPADAKSTRVVQTTEKQP
ISDLCSTGLYYFRQTADFRLAYETEAARPASEWQKQELYIAPLYNHLIARGKNIHYHLIDASDVIFCGVPEEYQALLAQY
>Mature_240_residues
MIVIPMAGLSSRFFNAGYTQPKYMLDAGGMPLFDHALLSFAAYFGTTPFLFIVRDLYDTAAFVKTRCKALGIKDFKIVAL
EQPTRGQAETVYLGLTDVADTEPLTIFNIDTFRPGFTLPPIADTADGYLEVFKGEGSNWSYAKPADAKSTRVVQTTEKQP
ISDLCSTGLYYFRQTADFRLAYETEAARPASEWQKQELYIAPLYNHLIARGKNIHYHLIDASDVIFCGVPEEYQALLAQY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26879; Mature: 26879

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVIPMAGLSSRFFNAGYTQPKYMLDAGGMPLFDHALLSFAAYFGTTPFLFIVRDLYDTA
CEEEECCCCCHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AFVKTRCKALGIKDFKIVALEQPTRGQAETVYLGLTDVADTEPLTIFNIDTFRPGFTLPP
HHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCC
IADTADGYLEVFKGEGSNWSYAKPADAKSTRVVQTTEKQPISDLCSTGLYYFRQTADFRL
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEE
AYETEAARPASEWQKQELYIAPLYNHLIARGKNIHYHLIDASDVIFCGVPEEYQALLAQY
EEECCCCCCHHHHHHCCEEEEHHHHHHHHCCCCEEEEEEECCCEEEECCCHHHHHHHHCC
>Mature Secondary Structure
MIVIPMAGLSSRFFNAGYTQPKYMLDAGGMPLFDHALLSFAAYFGTTPFLFIVRDLYDTA
CEEEECCCCCHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AFVKTRCKALGIKDFKIVALEQPTRGQAETVYLGLTDVADTEPLTIFNIDTFRPGFTLPP
HHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCC
IADTADGYLEVFKGEGSNWSYAKPADAKSTRVVQTTEKQPISDLCSTGLYYFRQTADFRL
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEE
AYETEAARPASEWQKQELYIAPLYNHLIARGKNIHYHLIDASDVIFCGVPEEYQALLAQY
EEECCCCCCHHHHHHCCEEEEHHHHHHHHCCCCEEEEEEECCCEEEECCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA