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The map label for this gene is opsX [H]

Identifier: 119773244

GI number: 119773244

Start: 115093

End: 116145

Strand: Direct

Name: opsX [H]

Synonym: Sama_0102

Alternate gene names: 119773244

Gene position: 115093-116145 (Clockwise)

Preceding gene: 119773242

Following gene: 119773245

Centisome position: 2.67

GC content: 55.37

Gene sequence:

>1053_bases
ATGACATTTGATCCCAGCCTGATGAAATCCCTGTGTTTGCTCCGCCTCTCTGCCATCGGCGATGTGTGCCATGCCGTGGC
CATGGTGCAGGCGATTCAACGCCGTTATCCCGACCTTGCCGTCACCTGGGTGATAGGCAAAGTGGAATATCAACTGCTTA
AACATTTACCGGGCATCGAGTTTGTGATTTTCGATAAGTCGCAGGGTTTCAAGGCCTATGGCCAGCTGTGTCGTGCTCTC
AAAGGGCGACATTTCGATGTTCTGCTGCATATGCAGGTGGCGCTCAGGGCCACCATAGCCTCCTTGATGATCCCGGCCAA
AGTGCGTATTGGTTTTGACCGTGCCCGCGCCAAAGAAGGGCAGTGGCTGGTGACCAACGAGCGGGTCGAGGCCATGGCGA
CTCCCCATGTGTTGGAAGGCTTTATGGGCTTTGCCAGGAAACTGGGCGTGACCGAGCTGCCTCCCTCATGGGACATGCAT
ATTCCTGCCGCAGACGAAGTGTTCGCGAAAGAGTTGGTTGCTGATGGCGAAAAGGTTCTGGCCATTTGCGCCGCCGCGAG
TAAGGCTGAGCGCAACTGGCTGCCCGAGCGTTACGCCGCCGTGGCTGATTATGCTGTTTCCAAAGGATACAGGGTGCTGC
TTTGCGGCGGCCCAGCACAGCTTGAAAAAGATCTGGCTGCGGCAATTGAGGCCAATTGTTCGTCTAAGCTAACCAATCTT
GTTGGAAAAACCTCTTTGATTCAGCTTTTGGCGCTATTAAAGCGAGTTTCACTGGTGATTGCACCGGATACCGGTCCTGC
CCACATGGCGGTGACTCAGGGCACGCCCGTGATTGGTCTCTACGCACACTCTAACCCAGGCCGAACCGGACCTTATTTCA
GCCGCGAGCTGACAGTCAGTGTCTATGACCAGGTGATTGCCGAGCAGTATCCCAATCAGCAAATTCCCTGGGGTACCCGG
GCCAAGGGCGACACTCTGATGGAAAAAATTGAAGTTGCTGACGTTTGTCGCATGTTCGACAGGGCCACGGACGTCGCCAC
CCAGGAGGTGTAA

Upstream 100 bases:

>100_bases
GATGGTTTTGTTGCTGCATCGCGGGAATTCTTGTCCAAAGCGTGGAACCTGCGGCCATTCTACATTAAGATCCGGGCTTT
GCACCAAGGCCAGCCCAACC

Downstream 100 bases:

>100_bases
GGTTATGACTCAATCAATGGCCCCAAACTCCGTGGTCACGCAATCTATGGCTCCAAAATTTTTGTTTATCCCCGTCTCTT
CTGCTGAAGGCATGGGGGAG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MTFDPSLMKSLCLLRLSAIGDVCHAVAMVQAIQRRYPDLAVTWVIGKVEYQLLKHLPGIEFVIFDKSQGFKAYGQLCRAL
KGRHFDVLLHMQVALRATIASLMIPAKVRIGFDRARAKEGQWLVTNERVEAMATPHVLEGFMGFARKLGVTELPPSWDMH
IPAADEVFAKELVADGEKVLAICAAASKAERNWLPERYAAVADYAVSKGYRVLLCGGPAQLEKDLAAAIEANCSSKLTNL
VGKTSLIQLLALLKRVSLVIAPDTGPAHMAVTQGTPVIGLYAHSNPGRTGPYFSRELTVSVYDQVIAEQYPNQQIPWGTR
AKGDTLMEKIEVADVCRMFDRATDVATQEV

Sequences:

>Translated_350_residues
MTFDPSLMKSLCLLRLSAIGDVCHAVAMVQAIQRRYPDLAVTWVIGKVEYQLLKHLPGIEFVIFDKSQGFKAYGQLCRAL
KGRHFDVLLHMQVALRATIASLMIPAKVRIGFDRARAKEGQWLVTNERVEAMATPHVLEGFMGFARKLGVTELPPSWDMH
IPAADEVFAKELVADGEKVLAICAAASKAERNWLPERYAAVADYAVSKGYRVLLCGGPAQLEKDLAAAIEANCSSKLTNL
VGKTSLIQLLALLKRVSLVIAPDTGPAHMAVTQGTPVIGLYAHSNPGRTGPYFSRELTVSVYDQVIAEQYPNQQIPWGTR
AKGDTLMEKIEVADVCRMFDRATDVATQEV
>Mature_349_residues
TFDPSLMKSLCLLRLSAIGDVCHAVAMVQAIQRRYPDLAVTWVIGKVEYQLLKHLPGIEFVIFDKSQGFKAYGQLCRALK
GRHFDVLLHMQVALRATIASLMIPAKVRIGFDRARAKEGQWLVTNERVEAMATPHVLEGFMGFARKLGVTELPPSWDMHI
PAADEVFAKELVADGEKVLAICAAASKAERNWLPERYAAVADYAVSKGYRVLLCGGPAQLEKDLAAAIEANCSSKLTNLV
GKTSLIQLLALLKRVSLVIAPDTGPAHMAVTQGTPVIGLYAHSNPGRTGPYFSRELTVSVYDQVIAEQYPNQQIPWGTRA
KGDTLMEKIEVADVCRMFDRATDVATQEV

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790062, Length=309, Percent_Identity=24.5954692556634, Blast_Score=85, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38436; Mature: 38305

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFDPSLMKSLCLLRLSAIGDVCHAVAMVQAIQRRYPDLAVTWVIGKVEYQLLKHLPGIE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCE
FVIFDKSQGFKAYGQLCRALKGRHFDVLLHMQVALRATIASLMIPAKVRIGFDRARAKEG
EEEEECCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCHHEEECCHHHHCCCC
QWLVTNERVEAMATPHVLEGFMGFARKLGVTELPPSWDMHIPAADEVFAKELVADGEKVL
CEEEECCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHH
AICAAASKAERNWLPERYAAVADYAVSKGYRVLLCGGPAQLEKDLAAAIEANCSSKLTNL
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCHHHHHHHH
VGKTSLIQLLALLKRVSLVIAPDTGPAHMAVTQGTPVIGLYAHSNPGRTGPYFSRELTVS
HHHHHHHHHHHHHHHCEEEEECCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHH
VYDQVIAEQYPNQQIPWGTRAKGDTLMEKIEVADVCRMFDRATDVATQEV
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TFDPSLMKSLCLLRLSAIGDVCHAVAMVQAIQRRYPDLAVTWVIGKVEYQLLKHLPGIE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCE
FVIFDKSQGFKAYGQLCRALKGRHFDVLLHMQVALRATIASLMIPAKVRIGFDRARAKEG
EEEEECCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCHHEEECCHHHHCCCC
QWLVTNERVEAMATPHVLEGFMGFARKLGVTELPPSWDMHIPAADEVFAKELVADGEKVL
CEEEECCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHH
AICAAASKAERNWLPERYAAVADYAVSKGYRVLLCGGPAQLEKDLAAAIEANCSSKLTNL
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCHHHHHHHH
VGKTSLIQLLALLKRVSLVIAPDTGPAHMAVTQGTPVIGLYAHSNPGRTGPYFSRELTVS
HHHHHHHHHHHHHHHCEEEEECCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHH
VYDQVIAEQYPNQQIPWGTRAKGDTLMEKIEVADVCRMFDRATDVATQEV
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]