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The map label for this gene is cc4 [H]

Identifier: 119773233

GI number: 119773233

Start: 102313

End: 102933

Strand: Reverse

Name: cc4 [H]

Synonym: Sama_0091

Alternate gene names: 119773233

Gene position: 102933-102313 (Counterclockwise)

Preceding gene: 119773235

Following gene: 119773232

Centisome position: 2.39

GC content: 54.27

Gene sequence:

>621_bases
ATGAAAAAGTTAGCTCTTGCGCTGTCTGTTTTCGCTGCTATGTCTACCAATGCTATGGCTGAAGGTGATGCGGCGGCGGG
TCAATCCAAAGCGGCTCTGTGCGTTGCCTGTCACGGCGCCGATGGCAACAGCATGATCGATATGTACCCCAAGCTGGCCG
GTCAACACGCTAAGTACCTGGAAAAGCAACTGCACGAATTCCAAAGTGCCATGAAGACCGGCGGCAAAGAAGGCCGTATG
GATCCTATCATGGGCGGGATGGTAATGACCCTGAACGAACAGGATATGGCTGATTTGGCTGCCTTCTTTGCCAGTCAGAC
CCAAACCCACTCACCTGTTGCCGATGTACCCGCTCTGGGTGAGCAGCTGTACAAGGGTGGCGACATGTCCCGTGGCATCA
CCGCCTGTATCGCCTGTCACGGTCCAGAAGGTAAAGGTACCGAGCAAGCCGGTTTCCCAATGGTTTCTGGCCAGCACGCC
AACTACATCAAGATCCAGCTCACCAAGTTCCGCGACAAGGCTCGTACCAACGACCTGAACGGCATGATGCAGGATGTAGC
GAAAAAGCTGAGCGATGCCGATATCGACGCACTGTCCAAGTACCTTGCTAACCTGAAGTAA

Upstream 100 bases:

>100_bases
GTGTAAAATATTGCCCCGATCACATATACGCTATATTACCACGCTTGCGGGCCAGGCCGGTAAGCTCGGGACAATAATCT
TAACAAGAAGTTGGAACGCT

Downstream 100 bases:

>100_bases
GTCTTGGTTCAGATAAAGGGCGACTGAGTTCGCCCTTTTCTTTAGCCCTCAGGTTTACGTTGACGTAAACTGATTACATT
TTCACTTGACACTGATCACG

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MKKLALALSVFAAMSTNAMAEGDAAAGQSKAALCVACHGADGNSMIDMYPKLAGQHAKYLEKQLHEFQSAMKTGGKEGRM
DPIMGGMVMTLNEQDMADLAAFFASQTQTHSPVADVPALGEQLYKGGDMSRGITACIACHGPEGKGTEQAGFPMVSGQHA
NYIKIQLTKFRDKARTNDLNGMMQDVAKKLSDADIDALSKYLANLK

Sequences:

>Translated_206_residues
MKKLALALSVFAAMSTNAMAEGDAAAGQSKAALCVACHGADGNSMIDMYPKLAGQHAKYLEKQLHEFQSAMKTGGKEGRM
DPIMGGMVMTLNEQDMADLAAFFASQTQTHSPVADVPALGEQLYKGGDMSRGITACIACHGPEGKGTEQAGFPMVSGQHA
NYIKIQLTKFRDKARTNDLNGMMQDVAKKLSDADIDALSKYLANLK
>Mature_206_residues
MKKLALALSVFAAMSTNAMAEGDAAAGQSKAALCVACHGADGNSMIDMYPKLAGQHAKYLEKQLHEFQSAMKTGGKEGRM
DPIMGGMVMTLNEQDMADLAAFFASQTQTHSPVADVPALGEQLYKGGDMSRGITACIACHGPEGKGTEQAGFPMVSGQHA
NYIKIQLTKFRDKARTNDLNGMMQDVAKKLSDADIDALSKYLANLK

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 21909; Mature: 21909

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
7.3 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLALALSVFAAMSTNAMAEGDAAAGQSKAALCVACHGADGNSMIDMYPKLAGQHAKYL
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCHHHHHH
EKQLHEFQSAMKTGGKEGRMDPIMGGMVMTLNEQDMADLAAFFASQTQTHSPVADVPALG
HHHHHHHHHHHHCCCCCCCCCHHHCCEEEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHH
EQLYKGGDMSRGITACIACHGPEGKGTEQAGFPMVSGQHANYIKIQLTKFRDKARTNDLN
HHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHCCHHH
GMMQDVAKKLSDADIDALSKYLANLK
HHHHHHHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKKLALALSVFAAMSTNAMAEGDAAAGQSKAALCVACHGADGNSMIDMYPKLAGQHAKYL
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCHHHHHH
EKQLHEFQSAMKTGGKEGRMDPIMGGMVMTLNEQDMADLAAFFASQTQTHSPVADVPALG
HHHHHHHHHHHHCCCCCCCCCHHHCCEEEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHH
EQLYKGGDMSRGITACIACHGPEGKGTEQAGFPMVSGQHANYIKIQLTKFRDKARTNDLN
HHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHCCHHH
GMMQDVAKKLSDADIDALSKYLANLK
HHHHHHHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026750; 9032080 [H]