| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
Click here to switch to the map view.
The map label for this gene is besA [H]
Identifier: 119773221
GI number: 119773221
Start: 86728
End: 87702
Strand: Reverse
Name: besA [H]
Synonym: Sama_0079
Alternate gene names: 119773221
Gene position: 87702-86728 (Counterclockwise)
Preceding gene: 119773222
Following gene: 119773219
Centisome position: 2.04
GC content: 54.46
Gene sequence:
>975_bases ATGACAAGGATATGTGCTCTCTTACTCGCCTGCTGCGCTCAGTTTGCAAATGCTACAACGGCCTCAGATGCCACAGCTGA CTCGCATGAGCTACACACAACTGTCGATAGGCATGTTGCCTCCCAGCTTGGCGGGCAACGTGGCAATGGACTGCTCTATG AAATAGTGGATACCCAGGTTTGGGATGTACCGGACCCCGGCAGCGGACGACACTATCAGGTATTTGTGGCGCTGCCGGCA TCCTATGAAAAGGAGCCTTCACGGCGCTATCCAGTGCTCTACGTCACCGATGCGGATTATGCTTTTCCCTTGGTGAAACA GATAGCAAGGCGTCTGAATGGTCACGGTCCGGCCATTGAAGACTTTATTTTGGTAGGACTGTCTTATTCGGTCGGTGACC ATGGCGTACCAAGCCGCCGACGCGACTACACCCCCACACCCAACGGCCCGGGGGCGGATGCCACAAAGGGCGTCCATGGA GAGGGACAAACCTATCTTGAGTACCTCAAGCACGTTGCAATTCCCTTCGTAGCGGATAAATACCGCACCGATGAGGCACA ACGGCTGTTCCTCGGCCACTCCTACGGCGGACTCTTGGGGGCACAGGCGCTGTTGACTGATCCCAGGATGTTTGCCGGGT ATGTGCTTGGCAGTCCGTCATTTTGGTATGACAACAAAGTCATGTGGTCTTTCGAACAGCGCTACGCCAAAGCCAACAAG GATTTATCCGCGAAGGTGTATCTGTATGTCGGGGAATATGAAGATATGAAGCCCGGCGATACACGATATGCCACCCGTTA CAACATGGTCACGGATGCGCGCTATTTCGAGAAAACGCTCATGTCTCGCCGGTACCCGTCGCTGCAGCTAAGGTTGGATG TGCTGAACGACGAAGATCACCTGAGCGTGGCACCGCGCGGCTTTACCCATGGACTCAAGTATCTGTTGCCTGCATCCACA GGTAATAAGCCCTGA
Upstream 100 bases:
>100_bases CTCATCACCTCCAACAGGCGGATGGTTGAAACTTGAAAAACGCCTGCATTACATTCCACACAGCGCCACGCCGACCTCCC ACCATAAAAGGATGATTTGC
Downstream 100 bases:
>100_bases TCTGAGTGGTGTGGGCAAGCCTCAAACAAACGCTAATCCACACCACTCAAACAAAACCCAGCCCGCAGCTCCTATTCCCC AAGGTGAGTTTTCAGGAACT
Product: putative esterase
Products: NA
Alternate protein names: Bacillibactin trilactone hydrolase [H]
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTRICALLLACCAQFANATTASDATADSHELHTTVDRHVASQLGGQRGNGLLYEIVDTQVWDVPDPGSGRHYQVFVALPA SYEKEPSRRYPVLYVTDADYAFPLVKQIARRLNGHGPAIEDFILVGLSYSVGDHGVPSRRRDYTPTPNGPGADATKGVHG EGQTYLEYLKHVAIPFVADKYRTDEAQRLFLGHSYGGLLGAQALLTDPRMFAGYVLGSPSFWYDNKVMWSFEQRYAKANK DLSAKVYLYVGEYEDMKPGDTRYATRYNMVTDARYFEKTLMSRRYPSLQLRLDVLNDEDHLSVAPRGFTHGLKYLLPAST GNKP
Sequences:
>Translated_324_residues MTRICALLLACCAQFANATTASDATADSHELHTTVDRHVASQLGGQRGNGLLYEIVDTQVWDVPDPGSGRHYQVFVALPA SYEKEPSRRYPVLYVTDADYAFPLVKQIARRLNGHGPAIEDFILVGLSYSVGDHGVPSRRRDYTPTPNGPGADATKGVHG EGQTYLEYLKHVAIPFVADKYRTDEAQRLFLGHSYGGLLGAQALLTDPRMFAGYVLGSPSFWYDNKVMWSFEQRYAKANK DLSAKVYLYVGEYEDMKPGDTRYATRYNMVTDARYFEKTLMSRRYPSLQLRLDVLNDEDHLSVAPRGFTHGLKYLLPAST GNKP >Mature_323_residues TRICALLLACCAQFANATTASDATADSHELHTTVDRHVASQLGGQRGNGLLYEIVDTQVWDVPDPGSGRHYQVFVALPAS YEKEPSRRYPVLYVTDADYAFPLVKQIARRLNGHGPAIEDFILVGLSYSVGDHGVPSRRRDYTPTPNGPGADATKGVHGE GQTYLEYLKHVAIPFVADKYRTDEAQRLFLGHSYGGLLGAQALLTDPRMFAGYVLGSPSFWYDNKVMWSFEQRYAKANKD LSAKVYLYVGEYEDMKPGDTRYATRYNMVTDARYFEKTLMSRRYPSLQLRLDVLNDEDHLSVAPRGFTHGLKYLLPASTG NKP
Specific function: Catalyzes the hydrolysis of the trilactone cycle of ferri-bacillibactin (ferri-BB) complex, leading to the formation of bacillibactin monomers and to cytosolic iron release, thus making iron available for metabolic use. Can also hydrolyze bacillibactin (B
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: NA
Molecular weight: Translated: 36219; Mature: 36088
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRICALLLACCAQFANATTASDATADSHELHTTVDRHVASQLGGQRGNGLLYEIVDTQV CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEE WDVPDPGSGRHYQVFVALPASYEKEPSRRYPVLYVTDADYAFPLVKQIARRLNGHGPAIE ECCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHH DFILVGLSYSVGDHGVPSRRRDYTPTPNGPGADATKGVHGEGQTYLEYLKHVAIPFVADK HHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHH YRTDEAQRLFLGHSYGGLLGAQALLTDPRMFAGYVLGSPSFWYDNKVMWSFEQRYAKANK HCCCHHHEEEECCCCCHHHHHHHHHCCCHHHEEEEECCCCEEECCCEEEHHHHHHHHCCC DLSAKVYLYVGEYEDMKPGDTRYATRYNMVTDARYFEKTLMSRRYPSLQLRLDVLNDEDH CCCEEEEEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC LSVAPRGFTHGLKYLLPASTGNKP EEECCCCHHHCHHEEEECCCCCCC >Mature Secondary Structure TRICALLLACCAQFANATTASDATADSHELHTTVDRHVASQLGGQRGNGLLYEIVDTQV HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEE WDVPDPGSGRHYQVFVALPASYEKEPSRRYPVLYVTDADYAFPLVKQIARRLNGHGPAIE ECCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHH DFILVGLSYSVGDHGVPSRRRDYTPTPNGPGADATKGVHGEGQTYLEYLKHVAIPFVADK HHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHH YRTDEAQRLFLGHSYGGLLGAQALLTDPRMFAGYVLGSPSFWYDNKVMWSFEQRYAKANK HCCCHHHEEEECCCCCHHHHHHHHHCCCHHHEEEEECCCCEEECCCEEEHHHHHHHHCCC DLSAKVYLYVGEYEDMKPGDTRYATRYNMVTDARYFEKTLMSRRYPSLQLRLDVLNDEDH CCCEEEEEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC LSVAPRGFTHGLKYLLPASTGNKP EEECCCCHHHCHHEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]