| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is hutI
Identifier: 119773222
GI number: 119773222
Start: 87909
End: 89147
Strand: Reverse
Name: hutI
Synonym: Sama_0080
Alternate gene names: 119773222
Gene position: 89147-87909 (Counterclockwise)
Preceding gene: 119773225
Following gene: 119773221
Centisome position: 2.07
GC content: 59.81
Gene sequence:
>1239_bases ATGTCTTGGGATCAGGTTTGGATTGATATCAATATTGCCACCATGGACCCATCCATGAACGAGGCTTATGGCGCCATTAC CGATGCGGCGCTGGCGGTAAAAGACGGCAAAATAGCCTGGCTTGGCAAGCGCAGCGACCTGCCCGAATTCGATGTGCTGG CCACCCCTGTACACCGCGGCCATGGCGGCTGGCTGACCCCCGGCCTGATTGATGCCCACACTCACCTGGTATTTGCCGGT AATCGCGCCAACGAATTTGAGCTGCGTCTGCAGGGCGCAAGCTACGAAGAAATCGCCCGCGCCGGCGGCGGCATTGTCAG CACAGTAAAAGCCTGCCGCGACGCCGACGAAGCCGAGCTGTTTGACCTCGCCCGTCGCCGCCTGAATGCGTTGGCAAAGG AAGGGGTTACCACGGTGGAAATCAAATCAGGCTACGGCCTGGATTTGGATACCGAGCTTAAGCTACTGCGGGTTGCCCGC GAGCTTGGCCAGCACCACCACGTGGATGTAGTCACCACCTTCCTCGGTGCCCATGCCGTGCCCCCTGAGTTCAAAACCCT GGGCGAAGCCGGAACCGATGCCTATGTGGATCTGGTGGTCAACGAAATGCTGCCCGCCGTGGTGGCCGAGAACCTTGCCG ATGCCGCCGACGTATTCTGCGAAAACATCGCCTTTAACCTAGAGCAAACCGAGCGGGTTCTGAGCGCCGCCAAAACTTTG GGGCTGGATATCAAGCTGCACGCCGAGCAGCTCAGCAACCTCGGAGGCAGTGAACTGGCCGCGCGTCTTGGCGCCAAGTC GGTTGACCATATCGAATACCTCGACGAAGCCGGCGTAAAGGCCATTGCCCAAAGCGGCACCTGCGCCGTGCTGTTGCCGG GCGCCTTCTACTTCCTGCGGGAAACCAAGCTGCCTCCCATCGACCTTTTGCGTCAGTATCAGGTGCCCATGGTGCTTGCC AGCGATTTTAACCCCGGTTCATCACCTATCTGCTCGACCCTGCTGATGCTGAACATGGGCTGCACCCTGTTCCGTCTGAC GCCGGAAGAGGCCCTTGCCGGCGTAACCCGTAACGCCGCCCGCGCCCTTGGCCGTGACCAGCGCGTGGGCGTGTTACGTG AAGGTATGGAGGCCGACTTCTGCCTGTGGCGTATCTCCACCCCGGCGGAGCTGGCATACTCCTATGGCGTAAATCCACTG GTGGATGTGGTGAAAGGTGGCAGGCTAATTCATCAATAA
Upstream 100 bases:
>100_bases AGCCGTAACAATAGAAACAATAGATTAGTCAGTTGCCGCGACCTATTTTTATAACGACGGTACACAAAAAGCCTACATAA CAGCCACAGCAGGAGTCAGC
Downstream 100 bases:
>100_bases GGGCCCGGAATTGTTTCGGGAGCCAAGGCACGTTTTAATCTTGCGCTCCCCTATTAACTTCAACTTAGTTGGTACTGTCA CCACAACCATTTCAATCATT
Product: imidazolonepropionase
Products: NA
Alternate protein names: Imidazolone-5-propionate hydrolase
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MSWDQVWIDINIATMDPSMNEAYGAITDAALAVKDGKIAWLGKRSDLPEFDVLATPVHRGHGGWLTPGLIDAHTHLVFAG NRANEFELRLQGASYEEIARAGGGIVSTVKACRDADEAELFDLARRRLNALAKEGVTTVEIKSGYGLDLDTELKLLRVAR ELGQHHHVDVVTTFLGAHAVPPEFKTLGEAGTDAYVDLVVNEMLPAVVAENLADAADVFCENIAFNLEQTERVLSAAKTL GLDIKLHAEQLSNLGGSELAARLGAKSVDHIEYLDEAGVKAIAQSGTCAVLLPGAFYFLRETKLPPIDLLRQYQVPMVLA SDFNPGSSPICSTLLMLNMGCTLFRLTPEEALAGVTRNAARALGRDQRVGVLREGMEADFCLWRISTPAELAYSYGVNPL VDVVKGGRLIHQ
Sequences:
>Translated_412_residues MSWDQVWIDINIATMDPSMNEAYGAITDAALAVKDGKIAWLGKRSDLPEFDVLATPVHRGHGGWLTPGLIDAHTHLVFAG NRANEFELRLQGASYEEIARAGGGIVSTVKACRDADEAELFDLARRRLNALAKEGVTTVEIKSGYGLDLDTELKLLRVAR ELGQHHHVDVVTTFLGAHAVPPEFKTLGEAGTDAYVDLVVNEMLPAVVAENLADAADVFCENIAFNLEQTERVLSAAKTL GLDIKLHAEQLSNLGGSELAARLGAKSVDHIEYLDEAGVKAIAQSGTCAVLLPGAFYFLRETKLPPIDLLRQYQVPMVLA SDFNPGSSPICSTLLMLNMGCTLFRLTPEEALAGVTRNAARALGRDQRVGVLREGMEADFCLWRISTPAELAYSYGVNPL VDVVKGGRLIHQ >Mature_411_residues SWDQVWIDINIATMDPSMNEAYGAITDAALAVKDGKIAWLGKRSDLPEFDVLATPVHRGHGGWLTPGLIDAHTHLVFAGN RANEFELRLQGASYEEIARAGGGIVSTVKACRDADEAELFDLARRRLNALAKEGVTTVEIKSGYGLDLDTELKLLRVARE LGQHHHVDVVTTFLGAHAVPPEFKTLGEAGTDAYVDLVVNEMLPAVVAENLADAADVFCENIAFNLEQTERVLSAAKTLG LDIKLHAEQLSNLGGSELAARLGAKSVDHIEYLDEAGVKAIAQSGTCAVLLPGAFYFLRETKLPPIDLLRQYQVPMVLAS DFNPGSSPICSTLLMLNMGCTLFRLTPEEALAGVTRNAARALGRDQRVGVLREGMEADFCLWRISTPAELAYSYGVNPLV DVVKGGRLIHQ
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hutI family
Homologues:
Organism=Homo sapiens, GI223972677, Length=358, Percent_Identity=39.1061452513966, Blast_Score=218, Evalue=8e-57, Organism=Caenorhabditis elegans, GI17555004, Length=377, Percent_Identity=33.42175066313, Blast_Score=214, Evalue=7e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HUTI_SHEAM (A1S1N6)
Other databases:
- EMBL: CP000507 - RefSeq: YP_925962.1 - ProteinModelPortal: A1S1N6 - SMR: A1S1N6 - STRING: A1S1N6 - GeneID: 4602337 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_0080 - NMPDR: fig|326297.7.peg.74 - eggNOG: COG1228 - HOGENOM: HBG686142 - OMA: MNMACTL - ProtClustDB: PRK09356 - GO: GO:0005737 - HAMAP: MF_00372 - InterPro: IPR013108 - InterPro: IPR005920 - InterPro: IPR011059 - TIGRFAMs: TIGR01224
Pfam domain/function: PF07969 Amidohydro_3; SSF51338 Metalo_hydrolase
EC number: =3.5.2.7
Molecular weight: Translated: 44583; Mature: 44452
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: BINDING 82-82 BINDING 95-95 BINDING 145-145 BINDING 178-178 BINDING 250-250
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWDQVWIDINIATMDPSMNEAYGAITDAALAVKDGKIAWLGKRSDLPEFDVLATPVHRG CCCCEEEEEEEEEEECCCCHHHHHHHHHHEEEEECCCEEEEECCCCCCCCCEEECCCCCC HGGWLTPGLIDAHTHLVFAGNRANEFELRLQGASYEEIARAGGGIVSTVKACRDADEAEL CCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHCCCCHHHHHHHHCCCCHHHH FDLARRRLNALAKEGVTTVEIKSGYGLDLDTELKLLRVARELGQHHHVDVVTTFLGAHAV HHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC PPEFKTLGEAGTDAYVDLVVNEMLPAVVAENLADAADVFCENIAFNLEQTERVLSAAKTL CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH GLDIKLHAEQLSNLGGSELAARLGAKSVDHIEYLDEAGVKAIAQSGTCAVLLPGAFYFLR CCEEEEEHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEHHH ETKLPPIDLLRQYQVPMVLASDFNPGSSPICSTLLMLNMGCTLFRLTPEEALAGVTRNAA HCCCCHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHH RALGRDQRVGVLREGMEADFCLWRISTPAELAYSYGVNPLVDVVKGGRLIHQ HHCCCCCCHHHHHCCCCCCEEEEEECCHHHHHHHCCCHHHHHHHCCCCCCCC >Mature Secondary Structure SWDQVWIDINIATMDPSMNEAYGAITDAALAVKDGKIAWLGKRSDLPEFDVLATPVHRG CCCEEEEEEEEEEECCCCHHHHHHHHHHEEEEECCCEEEEECCCCCCCCCEEECCCCCC HGGWLTPGLIDAHTHLVFAGNRANEFELRLQGASYEEIARAGGGIVSTVKACRDADEAEL CCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHCCCCHHHHHHHHCCCCHHHH FDLARRRLNALAKEGVTTVEIKSGYGLDLDTELKLLRVARELGQHHHVDVVTTFLGAHAV HHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC PPEFKTLGEAGTDAYVDLVVNEMLPAVVAENLADAADVFCENIAFNLEQTERVLSAAKTL CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH GLDIKLHAEQLSNLGGSELAARLGAKSVDHIEYLDEAGVKAIAQSGTCAVLLPGAFYFLR CCEEEEEHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEHHH ETKLPPIDLLRQYQVPMVLASDFNPGSSPICSTLLMLNMGCTLFRLTPEEALAGVTRNAA HCCCCHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHH RALGRDQRVGVLREGMEADFCLWRISTPAELAYSYGVNPLVDVVKGGRLIHQ HHCCCCCCHHHHHCCCCCCEEEEEECCHHHHHHHCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA