| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119773213
Identifier: 119773213
GI number: 119773213
Start: 77654
End: 77893
Strand: Reverse
Name: 119773213
Synonym: Sama_0071
Alternate gene names: NA
Gene position: 77893-77654 (Counterclockwise)
Preceding gene: 119773214
Following gene: 119773212
Centisome position: 1.81
GC content: 54.17
Gene sequence:
>240_bases ATGGATGCTGTGATCCACGATAAAACCAATCAGGTATTTTTATTAGCGGCCAACGGCGTGGAAGCCAGGCTGGAGTACCA CCGCCAGGGTGACTGTATCGACTTCAATCGCACCTTCGTTCCTCCTGAGCTCAGGGGGCAAGGTCTGGCCGAAAAACTGG TCCGCTACGGGCTGGAATGGGCCAGGAAGCAGGGGCTCGACATTCACGCCAGCTGTTGGTACGTTCAAAAATTCCTCTAA
Upstream 100 bases:
>100_bases CTGAAAAAATGGCTCGAAACCGGTAAAGTCAGCCCACTGCCTGACTCCGCCAAAACTTATAAAGAACAACGCAAGCGTGA GCGTAATAACAAGGCATAAC
Downstream 100 bases:
>100_bases GACATGCGGTTGAAGGAAACCCAATGCCGATACATCTGGTGGCAGCCAAAGATTTCGTGACCAATGATTGGGCCGGTGGC AGCACAACTCAGCTGCTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MDAVIHDKTNQVFLLAANGVEARLEYHRQGDCIDFNRTFVPPELRGQGLAEKLVRYGLEWARKQGLDIHASCWYVQKFL
Sequences:
>Translated_79_residues MDAVIHDKTNQVFLLAANGVEARLEYHRQGDCIDFNRTFVPPELRGQGLAEKLVRYGLEWARKQGLDIHASCWYVQKFL >Mature_79_residues MDAVIHDKTNQVFLLAANGVEARLEYHRQGDCIDFNRTFVPPELRGQGLAEKLVRYGLEWARKQGLDIHASCWYVQKFL
Specific function: Unknown
COG id: COG2388
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9148; Mature: 9148
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAVIHDKTNQVFLLAANGVEARLEYHRQGDCIDFNRTFVPPELRGQGLAEKLVRYGLEW CCCEECCCCCEEEEEEECCCEEEEEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHH ARKQGLDIHASCWYVQKFL HHHCCCEECHHHHEEEECC >Mature Secondary Structure MDAVIHDKTNQVFLLAANGVEARLEYHRQGDCIDFNRTFVPPELRGQGLAEKLVRYGLEW CCCEECCCCCEEEEEEECCCEEEEEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHH ARKQGLDIHASCWYVQKFL HHHCCCEECHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA