Click here to switch to the map view.

The map label for this gene is smg

Identifier: 119773188

GI number: 119773188

Start: 49901

End: 50380

Strand: Direct

Name: smg

Synonym: Sama_0046

Alternate gene names: 119773188

Gene position: 49901-50380 (Clockwise)

Preceding gene: 119773187

Following gene: 119773190

Centisome position: 1.16

GC content: 48.12

Gene sequence:

>480_bases
ATGTTTGACATCCTCATGTACCTATTCGAGAACTATGTTCAGAATGACCTGGAAGTTGACATGCTGGTGGACGAAGACCA
GCTGAAAAAAGAACTGGCTTTGGCCGGGTTTCGCCAAACAGAAATTATTAAAGCGTTGAATTGGCTGGAGCATCTGGCTG
ATCTTCGCGACAGTGAACAACCTTATCTGTGCCACCACGAGCAGCACTCATTTCGGGTGTATACACCAGAAGAAATGGAG
CGCCTGGACGTGGAGTGCCGTGGCTTTCTTATGTTCCTTGAACAGATAAAGGTTCTCAATGTCGAGGCCAGGGAGATGGT
GATCGACAGAGTGATGGATTTGGACGAGTCCAGCCTCACATTGGACGATCTGAAATGGGTGATCATGATGGTGCTCTTTA
ATGCACCAGGCCAGGAAATGGCATACAACCAGATGGAAAATATGATGTTTGACGAGCAACCGGGGCGGTTGCATTCCTGA

Upstream 100 bases:

>100_bases
AACCGATAGATCTTGTGCTGGAACAAATACTTGAGTTGGAGTTACAAGGTTGGGTTGCTGCAGTACCCGGTGGTTACGTC
AGAGTGAAGAGGAATTAGCC

Downstream 100 bases:

>100_bases
ACCGTCAACCATCGCAATAAAAAAGGACACCAAGAGGTCTCCTTTTTTATTGAGAATATGTCCAGCACCGCAGTAAGTGG
TTCAGGTGGCCCGGCTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MFDILMYLFENYVQNDLEVDMLVDEDQLKKELALAGFRQTEIIKALNWLEHLADLRDSEQPYLCHHEQHSFRVYTPEEME
RLDVECRGFLMFLEQIKVLNVEAREMVIDRVMDLDESSLTLDDLKWVIMMVLFNAPGQEMAYNQMENMMFDEQPGRLHS

Sequences:

>Translated_159_residues
MFDILMYLFENYVQNDLEVDMLVDEDQLKKELALAGFRQTEIIKALNWLEHLADLRDSEQPYLCHHEQHSFRVYTPEEME
RLDVECRGFLMFLEQIKVLNVEAREMVIDRVMDLDESSLTLDDLKWVIMMVLFNAPGQEMAYNQMENMMFDEQPGRLHS
>Mature_159_residues
MFDILMYLFENYVQNDLEVDMLVDEDQLKKELALAGFRQTEIIKALNWLEHLADLRDSEQPYLCHHEQHSFRVYTPEEME
RLDVECRGFLMFLEQIKVLNVEAREMVIDRVMDLDESSLTLDDLKWVIMMVLFNAPGQEMAYNQMENMMFDEQPGRLHS

Specific function: Unknown

COG id: COG2922

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smg family

Homologues:

Organism=Escherichia coli, GI1789679, Length=159, Percent_Identity=55.3459119496855, Blast_Score=172, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SMG_SHEAM (A1S1K2)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_925928.1
- STRING:   A1S1K2
- GeneID:   4602303
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_0046
- NMPDR:   fig|326297.7.peg.41
- eggNOG:   COG2922
- HOGENOM:   HBG518884
- OMA:   EMRVDQD
- PhylomeDB:   A1S1K2
- ProtClustDB:   CLSK905556
- HAMAP:   MF_00598
- InterPro:   IPR007456

Pfam domain/function: PF04361 DUF494

EC number: NA

Molecular weight: Translated: 19000; Mature: 19000

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
8.2 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
8.2 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDILMYLFENYVQNDLEVDMLVDEDQLKKELALAGFRQTEIIKALNWLEHLADLRDSEQ
CHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
PYLCHHEQHSFRVYTPEEMERLDVECRGFLMFLEQIKVLNVEAREMVIDRVMDLDESSLT
CCEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCC
LDDLKWVIMMVLFNAPGQEMAYNQMENMMFDEQPGRLHS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFDILMYLFENYVQNDLEVDMLVDEDQLKKELALAGFRQTEIIKALNWLEHLADLRDSEQ
CHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
PYLCHHEQHSFRVYTPEEMERLDVECRGFLMFLEQIKVLNVEAREMVIDRVMDLDESSLT
CCEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCC
LDDLKWVIMMVLFNAPGQEMAYNQMENMMFDEQPGRLHS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA