| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718871
Identifier: 119718871
GI number: 119718871
Start: 4932078
End: 4932707
Strand: Reverse
Name: 119718871
Synonym: Noca_4654
Alternate gene names: NA
Gene position: 4932707-4932078 (Counterclockwise)
Preceding gene: 119718872
Following gene: 119718870
Centisome position: 98.93
GC content: 62.7
Gene sequence:
>630_bases ATGACTGGGAAGGTGCTGGTCTTCTCTCGCCGCCTGATAACCGGGTTCGAGCCGTTCACGCCGGCTCTCGGAGAGATGGA CCTCGGCGCGATCGGAGACGACTGCTGGTGGGAGGCACGGACCGCCGCAGAGCGATCGACGAATGCAGTACAGGCCATCC CCGCCGCTGTGCTGTGCGACTCGGCAGGCAACTATCTCTTGCTTCAACGGGTGGATGAAGCGCGCAAGTCACTCAGATCG CGGTTGTCGTTGGTTATCGGGGGTCATGTTGAACCACCTGCTGGCGCGGATCTCCCGCCCGAGGTGAACTTCGAGACGCT CCTACGGACTACGTTGTTGCGCGAACTGCGGGAGGAACTAAGCCTCCAACTCGATCCAGGAGCGCTCGAATCAGTCGGAA TGGTCGTTGACCCGCGCGGACTCGACGCGTCGCGGCACGTGGCGTTCGTGTACCGGGCCACGCTGGGACGTTCGATGGAT GTGGACGTCACGGCGTTCGAGGAGTTCGCCGTGGACTCCGCCTTCTCCACACGGATGTGGCCAGGTCGCCAACTACGCCG CTTGCTACCGAGCCTTGATCCTTGGTCAGCGATCCTGGTCAGAAGTGGAGCCCTGCTTGGGTCTGGCTAG
Upstream 100 bases:
>100_bases TCTTCCTGGGCCTCGATACGAGCACGACCGAAGCATCGCTTGAGAACTCAGCCAGGCTTGTCGTCGAGGTCATGCTGGGC CTGATGGAGGCGCAGATGCC
Downstream 100 bases:
>100_bases TCGCGCGAAGATCCGCTCGGATGCATGGAACGTCCTCCGCGGTGCTCGATAGTCGCTCCTCGTCCGGACTCACCGAGTTG TCGGACCCCTCGAATGAGGT
Product: NUDIX hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MTGKVLVFSRRLITGFEPFTPALGEMDLGAIGDDCWWEARTAAERSTNAVQAIPAAVLCDSAGNYLLLQRVDEARKSLRS RLSLVIGGHVEPPAGADLPPEVNFETLLRTTLLRELREELSLQLDPGALESVGMVVDPRGLDASRHVAFVYRATLGRSMD VDVTAFEEFAVDSAFSTRMWPGRQLRRLLPSLDPWSAILVRSGALLGSG
Sequences:
>Translated_209_residues MTGKVLVFSRRLITGFEPFTPALGEMDLGAIGDDCWWEARTAAERSTNAVQAIPAAVLCDSAGNYLLLQRVDEARKSLRS RLSLVIGGHVEPPAGADLPPEVNFETLLRTTLLRELREELSLQLDPGALESVGMVVDPRGLDASRHVAFVYRATLGRSMD VDVTAFEEFAVDSAFSTRMWPGRQLRRLLPSLDPWSAILVRSGALLGSG >Mature_208_residues TGKVLVFSRRLITGFEPFTPALGEMDLGAIGDDCWWEARTAAERSTNAVQAIPAAVLCDSAGNYLLLQRVDEARKSLRSR LSLVIGGHVEPPAGADLPPEVNFETLLRTTLLRELREELSLQLDPGALESVGMVVDPRGLDASRHVAFVYRATLGRSMDV DVTAFEEFAVDSAFSTRMWPGRQLRRLLPSLDPWSAILVRSGALLGSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22792; Mature: 22661
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGKVLVFSRRLITGFEPFTPALGEMDLGAIGDDCWWEARTAAERSTNAVQAIPAAVLCD CCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHEEC SAGNYLLLQRVDEARKSLRSRLSLVIGGHVEPPAGADLPPEVNFETLLRTTLLRELREEL CCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH SLQLDPGALESVGMVVDPRGLDASRHVAFVYRATLGRSMDVDVTAFEEFAVDSAFSTRMW CEECCCCCHHHCCEEECCCCCCCCHHHHHEEHHHCCCCCCCCHHHHHHHHHHHHHHCCCC PGRQLRRLLPSLDPWSAILVRSGALLGSG CHHHHHHHCCCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure TGKVLVFSRRLITGFEPFTPALGEMDLGAIGDDCWWEARTAAERSTNAVQAIPAAVLCD CCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHEEC SAGNYLLLQRVDEARKSLRSRLSLVIGGHVEPPAGADLPPEVNFETLLRTTLLRELREEL CCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH SLQLDPGALESVGMVVDPRGLDASRHVAFVYRATLGRSMDVDVTAFEEFAVDSAFSTRMW CEECCCCCHHHCCEEECCCCCCCCHHHHHEEHHHCCCCCCCCHHHHHHHHHHHHHHCCCC PGRQLRRLLPSLDPWSAILVRSGALLGSG CHHHHHHHCCCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA