| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119718870
Identifier: 119718870
GI number: 119718870
Start: 4931409
End: 4931759
Strand: Reverse
Name: 119718870
Synonym: Noca_4653
Alternate gene names: NA
Gene position: 4931759-4931409 (Counterclockwise)
Preceding gene: 119718871
Following gene: 119718866
Centisome position: 98.91
GC content: 62.96
Gene sequence:
>351_bases ATGAGCGAGGCACTGTCCGAGGCTCGCCGCGCATCAGCGGCAATCTTCGGCAACGAGAAGGTTGTCGAGGTGGTTCTGCA ACTGAACGACCTCGCGCCAACCCATGCCCAAGCGCTCGCTGCAAAGTTGGGCGTTGCCCACAACCTGGTCCGGGCAGTTC TGCTGAAGTTGCACGAGGCTGGAGTCATTTTGGCGCTGCCTCGAACCGGACGGCGGAGCGCCTTGTACTACGACCTACCG GGCGAACCTGATCGAGAGACCTGGAACCGGCTCGTGCACCTGTGTCGCGCTCTTGCCAACGGGTCTGCCGAGACCGAAGA GCCGAGCGAGAGCACCCGCTCTTCGGCTTGA
Upstream 100 bases:
>100_bases CAGCCTACGGAGTCGGCTCTTCATATTCCATCCCCCACCTTGGCTAGTCCGAACCGCGTGGGCGGTATAGCGATGCGCTA CACGAAGTACGCTAGACACG
Downstream 100 bases:
>100_bases GCCCCGCACGACCCTTCACGGGTCTCTGGGAGACGCGATTGATCCGGCGTGTGAATAGCATCGAGGCCCCGGTCGCTTCT GGACGTGACGTCAAATCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MSEALSEARRASAAIFGNEKVVEVVLQLNDLAPTHAQALAAKLGVAHNLVRAVLLKLHEAGVILALPRTGRRSALYYDLP GEPDRETWNRLVHLCRALANGSAETEEPSESTRSSA
Sequences:
>Translated_116_residues MSEALSEARRASAAIFGNEKVVEVVLQLNDLAPTHAQALAAKLGVAHNLVRAVLLKLHEAGVILALPRTGRRSALYYDLP GEPDRETWNRLVHLCRALANGSAETEEPSESTRSSA >Mature_115_residues SEALSEARRASAAIFGNEKVVEVVLQLNDLAPTHAQALAAKLGVAHNLVRAVLLKLHEAGVILALPRTGRRSALYYDLPG EPDRETWNRLVHLCRALANGSAETEEPSESTRSSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12509; Mature: 12378
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEALSEARRASAAIFGNEKVVEVVLQLNDLAPTHAQALAAKLGVAHNLVRAVLLKLHEA CCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GVILALPRTGRRSALYYDLPGEPDRETWNRLVHLCRALANGSAETEEPSESTRSSA CEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SEALSEARRASAAIFGNEKVVEVVLQLNDLAPTHAQALAAKLGVAHNLVRAVLLKLHEA CHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GVILALPRTGRRSALYYDLPGEPDRETWNRLVHLCRALANGSAETEEPSESTRSSA CEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA