| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718813
Identifier: 119718813
GI number: 119718813
Start: 4866788
End: 4867612
Strand: Reverse
Name: 119718813
Synonym: Noca_4596
Alternate gene names: NA
Gene position: 4867612-4866788 (Counterclockwise)
Preceding gene: 119718815
Following gene: 119718807
Centisome position: 97.63
GC content: 77.09
Gene sequence:
>825_bases GTGCTCGCCGCGGCGCGCTGGCACGGGGTGCCGGCGCCCGGCCCGTACGCCGCGCTGCGCGAGGCCCTGCTTCGCGACGA CGGCACCATCCGGCGCACCATCCTCGACCGGGCGACCCAGACCAACGAGGCGGGCCGGCTGGCCACTCTGGTGCCCGCCT TCGCGCTCGCCGCCGGCGCCGGCCCCGTGGCGCTGGTCGAGGTCGGCGCCAGTGCCGGGCTCTGCCTCTTCCCGGACCGC TACCGCTATGCGTGGCGCACCGCCTCCGGTGTACACCGGGTCGGCGACCCCGCCGCCCCGGAGCTCGCCTGCGCGGTGCT GGGCGACGGACCGCTTCCCGACGGCCCGCCCGAGGTGGTCTGGCGAGCGGGCATCGACCTGGCGCCGGTCGACGTCACCG ACGACGACCAGGTGCGCTGGCTGGCCGCGCTGGTCTGGCCCGAGCACGACGACCGCCGGGCCCGGCTCGAGCGTGCCGTC GAGGTCGCTCGGGCCGATCCGCCGTACCTGGTCCGCGGTGACCTGCTCGAAGAGCTCCCCGCGCTGGTCGACCGGGCGCG CGAGCACGCCCCGGTGCTGGTGTTCCACAGCGCGGTGGTCGCCTACCTGCCCGAGGAGCGCCGGACCGCGTTCCACGACC TGATGACCGGGCTGGTCGCGGCCGGTCGGTGCCACTGGGTGAGCAACGAGGGGCCGCGGGTGCTCCCCGCCGTCACCGCG ACCGGTCCGGCCGTGCCGGAGGACGAGCACGGCTTCGTGTTCGGCGTCGACGGGCGCGCGGTCGCCCGCACCCACGGCCA CGGCCGCAGCCTCCGCTGGTTCTAG
Upstream 100 bases:
>100_bases CCGCCCCGACGTCGCCCTGCTTCGCGGACTGGTCGCGGCCGACGAGGAGCTGCTGGCCTGGCTGGCGACCCTGCCGCTGA CCAAGCGCCAGCCCAACCTG
Downstream 100 bases:
>100_bases CCCGCGCCATCACGGTCCCGACCTCTCGGCCAATACTGGAACTTCTCGACCGAAGTTTCGGCCCAACAGTTCCGGTTTCC CCGGTTCACCGGGGAAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MLAAARWHGVPAPGPYAALREALLRDDGTIRRTILDRATQTNEAGRLATLVPAFALAAGAGPVALVEVGASAGLCLFPDR YRYAWRTASGVHRVGDPAAPELACAVLGDGPLPDGPPEVVWRAGIDLAPVDVTDDDQVRWLAALVWPEHDDRRARLERAV EVARADPPYLVRGDLLEELPALVDRAREHAPVLVFHSAVVAYLPEERRTAFHDLMTGLVAAGRCHWVSNEGPRVLPAVTA TGPAVPEDEHGFVFGVDGRAVARTHGHGRSLRWF
Sequences:
>Translated_274_residues MLAAARWHGVPAPGPYAALREALLRDDGTIRRTILDRATQTNEAGRLATLVPAFALAAGAGPVALVEVGASAGLCLFPDR YRYAWRTASGVHRVGDPAAPELACAVLGDGPLPDGPPEVVWRAGIDLAPVDVTDDDQVRWLAALVWPEHDDRRARLERAV EVARADPPYLVRGDLLEELPALVDRAREHAPVLVFHSAVVAYLPEERRTAFHDLMTGLVAAGRCHWVSNEGPRVLPAVTA TGPAVPEDEHGFVFGVDGRAVARTHGHGRSLRWF >Mature_274_residues MLAAARWHGVPAPGPYAALREALLRDDGTIRRTILDRATQTNEAGRLATLVPAFALAAGAGPVALVEVGASAGLCLFPDR YRYAWRTASGVHRVGDPAAPELACAVLGDGPLPDGPPEVVWRAGIDLAPVDVTDDDQVRWLAALVWPEHDDRRARLERAV EVARADPPYLVRGDLLEELPALVDRAREHAPVLVFHSAVVAYLPEERRTAFHDLMTGLVAAGRCHWVSNEGPRVLPAVTA TGPAVPEDEHGFVFGVDGRAVARTHGHGRSLRWF
Specific function: Unknown
COG id: COG4427
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29538; Mature: 29538
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAAARWHGVPAPGPYAALREALLRDDGTIRRTILDRATQTNEAGRLATLVPAFALAAGA CCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC GPVALVEVGASAGLCLFPDRYRYAWRTASGVHRVGDPAAPELACAVLGDGPLPDGPPEVV CCEEEEEECCCCCEEECCCCHHHEECCCCCCHHCCCCCCCCEEEEEECCCCCCCCCHHHH WRAGIDLAPVDVTDDDQVRWLAALVWPEHDDRRARLERAVEVARADPPYLVRGDLLEELP EECCCCEEECCCCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHH ALVDRAREHAPVLVFHSAVVAYLPEERRTAFHDLMTGLVAAGRCHWVSNEGPRVLPAVTA HHHHHHHHCCCEEEEHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEEC TGPAVPEDEHGFVFGVDGRAVARTHGHGRSLRWF CCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCC >Mature Secondary Structure MLAAARWHGVPAPGPYAALREALLRDDGTIRRTILDRATQTNEAGRLATLVPAFALAAGA CCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC GPVALVEVGASAGLCLFPDRYRYAWRTASGVHRVGDPAAPELACAVLGDGPLPDGPPEVV CCEEEEEECCCCCEEECCCCHHHEECCCCCCHHCCCCCCCCEEEEEECCCCCCCCCHHHH WRAGIDLAPVDVTDDDQVRWLAALVWPEHDDRRARLERAVEVARADPPYLVRGDLLEELP EECCCCEEECCCCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHH ALVDRAREHAPVLVFHSAVVAYLPEERRTAFHDLMTGLVAAGRCHWVSNEGPRVLPAVTA HHHHHHHHCCCEEEEHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEEC TGPAVPEDEHGFVFGVDGRAVARTHGHGRSLRWF CCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA