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The map label for this gene is 119718775

Identifier: 119718775

GI number: 119718775

Start: 4821524

End: 4822324

Strand: Reverse

Name: 119718775

Synonym: Noca_4556

Alternate gene names: NA

Gene position: 4822324-4821524 (Counterclockwise)

Preceding gene: 119718776

Following gene: 119718774

Centisome position: 96.72

GC content: 75.28

Gene sequence:

>801_bases
ATGAGTCTGCTCGACGACCTCCTCGACGACCTCAGGGCCGAGGGCGACCGGCTGTGGAACGCCGTCGCCGGCCTGGACGA
GGACGGCTGGCAGGCCCCGACCCCCGCCCCGGGGTGGACGGTCGCCACCCAGGTCGCCCACCTGCTGTGGACCGACGAGG
TCGCCGTGGTCGCCGCCGGCGCCCGCACGCCCGACGGCCAGCAGGCGTGGGACGCGCTGGTGCTCCAGGCCCTCGAGGAC
CCCACCGGCTTCGTCGACGCCCAGGCGATCGAGGTCGCGCGGCTGCGGCCCGAGGCACTGCTCGCCCGGTGGGGCGCGGC
GCGCGAGGCGCTCCCGCGAGCGCTGCGGGACTTCCCCGAGGGCCAGAAGATGCCGTGGTTCGGACCGCCCATGTCGCCGG
CCTCGATGGCGACCGCCCGGTTCATGGAGACCTGGGCGCACGCCCTCGACGTGTACGCCGCCCTCGAGGTCGCCCCGGAG
CGCACCGACCGGATCCGGCACGTCGCGCACCTCGGCGTACGCACCCGCGGCTTCGCGTTCTCCGTGCACGGGCTCGAGGC
ACCGGCCGAGGAGTTCCGCATCGAGCTGACCGCGCCGTCCGGCGAGACGTGGGCCTGGGGCCCGGAGGACGCCGAGCAGC
TCGTTCGCGGCTCGGCCTGGGACTTCTGCCTGCTGGTCACCCAGCGCGTGCACCGCGACGACACCGACCTGGTCGCGACC
GGCGCCGATGCCGAGAAGTGGCTGACGATCGCGCAGGCCTTTGCCGGTCCCGCCGGTGAGGGGAGGCCCTCCCGTGGCTG
A

Upstream 100 bases:

>100_bases
GCCTGGGCCTCGCGAACACGATCACCGACGACGCCCGCCGCCGCGGGCGCATCCTCGACCGCTGGGCCGAGGTGCTCGAC
CAGCACCTGAAGGAGACCGC

Downstream 100 bases:

>100_bases
GGCACCCACGCAGGGCCTCGAGAGGGCACTGCGGATCGGCAACTGCTCCGGCTTCTACGGCGACCGGCTCTCCGCGATGC
GGGAGATGCTCGAGGGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MSLLDDLLDDLRAEGDRLWNAVAGLDEDGWQAPTPAPGWTVATQVAHLLWTDEVAVVAAGARTPDGQQAWDALVLQALED
PTGFVDAQAIEVARLRPEALLARWGAAREALPRALRDFPEGQKMPWFGPPMSPASMATARFMETWAHALDVYAALEVAPE
RTDRIRHVAHLGVRTRGFAFSVHGLEAPAEEFRIELTAPSGETWAWGPEDAEQLVRGSAWDFCLLVTQRVHRDDTDLVAT
GADAEKWLTIAQAFAGPAGEGRPSRG

Sequences:

>Translated_266_residues
MSLLDDLLDDLRAEGDRLWNAVAGLDEDGWQAPTPAPGWTVATQVAHLLWTDEVAVVAAGARTPDGQQAWDALVLQALED
PTGFVDAQAIEVARLRPEALLARWGAAREALPRALRDFPEGQKMPWFGPPMSPASMATARFMETWAHALDVYAALEVAPE
RTDRIRHVAHLGVRTRGFAFSVHGLEAPAEEFRIELTAPSGETWAWGPEDAEQLVRGSAWDFCLLVTQRVHRDDTDLVAT
GADAEKWLTIAQAFAGPAGEGRPSRG
>Mature_265_residues
SLLDDLLDDLRAEGDRLWNAVAGLDEDGWQAPTPAPGWTVATQVAHLLWTDEVAVVAAGARTPDGQQAWDALVLQALEDP
TGFVDAQAIEVARLRPEALLARWGAAREALPRALRDFPEGQKMPWFGPPMSPASMATARFMETWAHALDVYAALEVAPER
TDRIRHVAHLGVRTRGFAFSVHGLEAPAEEFRIELTAPSGETWAWGPEDAEQLVRGSAWDFCLLVTQRVHRDDTDLVATG
ADAEKWLTIAQAFAGPAGEGRPSRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017517
- InterPro:   IPR017518
- InterPro:   IPR013917 [H]

Pfam domain/function: PF08608 Wyosine_form [H]

EC number: NA

Molecular weight: Translated: 28989; Mature: 28857

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLDDLLDDLRAEGDRLWNAVAGLDEDGWQAPTPAPGWTVATQVAHLLWTDEVAVVAAG
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEC
ARTPDGQQAWDALVLQALEDPTGFVDAQAIEVARLRPEALLARWGAAREALPRALRDFPE
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC
GQKMPWFGPPMSPASMATARFMETWAHALDVYAALEVAPERTDRIRHVAHLGVRTRGFAF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEE
SVHGLEAPAEEFRIELTAPSGETWAWGPEDAEQLVRGSAWDFCLLVTQRVHRDDTDLVAT
EECCCCCCHHHEEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEE
GADAEKWLTIAQAFAGPAGEGRPSRG
CCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SLLDDLLDDLRAEGDRLWNAVAGLDEDGWQAPTPAPGWTVATQVAHLLWTDEVAVVAAG
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEC
ARTPDGQQAWDALVLQALEDPTGFVDAQAIEVARLRPEALLARWGAAREALPRALRDFPE
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC
GQKMPWFGPPMSPASMATARFMETWAHALDVYAALEVAPERTDRIRHVAHLGVRTRGFAF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEE
SVHGLEAPAEEFRIELTAPSGETWAWGPEDAEQLVRGSAWDFCLLVTQRVHRDDTDLVAT
EECCCCCCHHHEEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEE
GADAEKWLTIAQAFAGPAGEGRPSRG
CCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]